Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3173 ATGGCGGGCAAACGAGAGCTTGTGCTAGGTATCTGTGCCCCGGGAATTGTTGAGGTTCCGCCTGATAAACCTCCATCTAGACCTGTTGCATATGAGATTGATACATCAGATCATTTTTACACTGAAATGGCAACCCCTGACCGAGATGAGTTGATTAGATGGGCTCGGGAGATTGCCTTAAAGCTAAAGTTTGCAATTGTAATTGGCAAATCCGACAACGGCAGCGATAAGAGGAAGCAATATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAAACCGGCACGAGGAAATGCGGCTGTCCATTTCGACTCCGTGGTTATTGTCATGCCGATAAAACATGGCATTTGACCGTTGTAAATGGCAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCGTCTCAAACCGGAAGAAAGGCAATGTATGGAGGAAATGTCAAGGAATTTGGTTCCGCCTAAGAATATAATGTCCACATTGAAAGATAGGGATCCAAACAACAAGACAACGGCAAAGCAACTCTACAATTTAAGTCATCGATTAAAACTTAAAATGAGGGCATCAATGACTGAAATGCAACACCTCTCCAAAAGACTTGTCGAGACCGGGTATTTTTTCAAACATAGGACGGTTGTTGCAGACGGATCCGAACACGTTCAAGACATTTTCTTTGCACATCCTAAATCTATAAGTTTGTTCAATTCTTTTCCTACTGTGCTTTTGATGGATTCGACATACAAAACAAACAAATACAAAATGCCGTTATTTGAGATTGTCGGATTCACATCAACTGGGAGATCTTTCAATGTTGGATTTGCTTGGCTTACCAATGAAAGAGAAGACAACTTCACTTGGGCTCTAGAGCAGTGTGTCAGTCTCTTAAGGAATGAGGATGTTAGACCGAAGGTGATTGTCACCGATAGGGATTTGGCTCTGATGAATGCAGTTTCCGAGGTATTTCCAACATCGGCTGCAATGGTTTGTCGTTTCCATGTAAAAAAGAACGTGAGCTCTAAGATGAAGGAAATTGTGAAAATCAAGAATGGAGAGAATGAGAAGCAGACTGATGTGTGGGATCAAATCACCGATGCTTTTAATGATGTGTTAGAGTCGCCAACGGAAAAAGAATATGCTGACAATGTTATGGTGTTTAGGGAGCTCTGTGCGAGATGGCCAAAGTTTTTGCGTTATGTTGAAGAGACTGTCCTAGACACTGATAAAGAAAGGGTTGTCAATGCTTGGGTAGACCAACATATGCACATGGGGAATCACACCACGAATAGAGCTGAATCATGTCATGGTGTGTTGAAAGGTTACTTGAAGGACGGTAACGGTGACTTGGTGAAAGGATGGGAAGCGATAAATAAGATGTTGATAAGTCAGTTCACCGAAGTACAAGGTGAATTCGGTCGGAGTATGTCTGTTGCGGAACACAGATACGATGATGATCCTCTTTACGCATTCTTGTTTTATAAAATCTCAAGAAAGGCTATGGATCACATTTATGACGAAGCAAACAGGGTCGAAGAATGTGGTATGGATAGCAAAAAGTGTGGCTGTGTTATGAGAAGGACATACGGGTTGCCATGTGCATGCTTGATTGCGAAGAAGATAAAAAATAACAAACCTATCCGACTGGATGAGATTCACCCTCAATGGAAGAAACTGTGTTTCGAAGATGAGCCGGCACCGGGCGATGTGGCTGACGATTATGATTGCTTGGCTGAGTGGAAAGCAATTCAGGAACGATTAAAAACAGCCGATGTTAGCGTGAAGAATGATATTAGGAATCAACTTCGTCTCATTGCATATCCAGAAACCACCTCTGTGAAACCTCCGCTTCAAAAGGCCAAAACAAAAGGTGCTAGAAAGAAAAAATCAGTTCGTGTCACAAGATCCACGAGCAGGGATAAGTCTCGGTGGGAGCATGTTGATGATCATATTGCAGCTACACAGGCATCTCAGTCGCAACCAACAAAGTCAAAGCCGTCGACTTCACAAACAGTGCCTGAGGTGCCTAAAGAACTCGTCATCAGTACTTTGACTCCAGCACCTCCAGCACCTCCTGAAATTCCTTTTATCAACCATATGCCGAAGTTCATGCACCCATTTATTGAAGATATTATTGACGTTGAAGGTGACGGTTATTGTGGATACCGTGTGGTAGCTTTGCACCAAAAAGGAAATCAACAAGATTATGAGTTGATCAGACTGAACATGGAGAGGGAGCTGAGATTGCATAAGGAATCATATGTGGAGTTGTTGGATACTGAGCGTTACAAGTATGTCACGGATGCACTTTTCCCACCACCGAGAAGGAGTAAACATGCTATTGCAACCAAGGACAAATGGTTTACTTTTCCGGATATGGGTTACGTTGTGGCTACTCATTTTCAGAGGGTTGTTGTTCAACTATCAAATATGGAAAGGTGTGGAGCATCTAGAACTTGTTTCCCATTGCGTGGCAAACCTCCATCAGACACGTCAGACTTGGATTCCAAGATTATTTGCATCGGCGCGCTCGCTGACCACTTTGTGTTAGTGCGATTGAAAGTAGGATGTCCGATACCTCCAACGGCTCATCAGTGGAAAAACTCTTGTTCCGAAGAAGCTGCAGAATGGGAGCCCATGTTTTTGGATAGAATGCAAAAGTTTGGTGAGCTGTTGACCATTGAAAGAGCAGGCGATGACTTAGTCACGATTGGAAAGGGTAGCAAAGACGATCCGTTGGAATTGTAG 2787 0.4338 MAGKRELVLGICAPGIVEVPPDKPPSRPVAYEIDTSDHFYTEMATPDRDELIRWAREIALKLKFAIVIGKSDNGSDKRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCPFRLRGYCHADKTWHLTVVNGKHNHELDKAVEGHLIVGRLKPEERQCMEEMSRNLVPPKNIMSTLKDRDPNNKTTAKQLYNLSHRLKLKMRASMTEMQHLSKRLVETGYFFKHRTVVADGSEHVQDIFFAHPKSISLFNSFPTVLLMDSTYKTNKYKMPLFEIVGFTSTGRSFNVGFAWLTNEREDNFTWALEQCVSLLRNEDVRPKVIVTDRDLALMNAVSEVFPTSAAMVCRFHVKKNVSSKMKEIVKIKNGENEKQTDVWDQITDAFNDVLESPTEKEYADNVMVFRELCARWPKFLRYVEETVLDTDKERVVNAWVDQHMHMGNHTTNRAESCHGVLKGYLKDGNGDLVKGWEAINKMLISQFTEVQGEFGRSMSVAEHRYDDDPLYAFLFYKISRKAMDHIYDEANRVEECGMDSKKCGCVMRRTYGLPCACLIAKKIKNNKPIRLDEIHPQWKKLCFEDEPAPGDVADDYDCLAEWKAIQERLKTADVSVKNDIRNQLRLIAYPETTSVKPPLQKAKTKGARKKKSVRVTRSTSRDKSRWEHVDDHIAATQASQSQPTKSKPSTSQTVPEVPKELVISTLTPAPPAPPEIPFINHMPKFMHPFIEDIIDVEGDGYCGYRVVALHQKGNQQDYELIRLNMERELRLHKESYVELLDTERYKYVTDALFPPPRRSKHAIATKDKWFTFPDMGYVVATHFQRVVVQLSNMERCGASRTCFPLRGKPPSDTSDLDSKIICIGALADHFVLVRLKVGCPIPPTAHQWKNSCSEEAAEWEPMFLDRMQKFGELLTIERAGDDLVTIGKGSKDDPLEL* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3173 928 MobiDBLite consensus disorder prediction 665 687 - -
Tpr3g3173 928 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 72 555 - -
Tpr3g3173 928 MobiDBLite consensus disorder prediction 627 687 - -
Tpr3g3173 928 Pfam Transcription factor AFT 89 138 IPR014842 GO:0000981|GO:0036086
Tpr3g3173 928 MobiDBLite consensus disorder prediction 648 663 - -
Tpr3g3173 928 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 72 555 IPR031052 GO:0006355
Tpr3g3173 928 Pfam MULE transposase domain 255 351 IPR018289 -
Tpr3g3173 928 MobiDBLite consensus disorder prediction 633 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3173 Tpr-Chr3 34964477 34968084 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g3173 MULE 1.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3173 - - gmx:100800409 576.63