Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3164 ATGAAGAAACAATGGTGTGAGATTGAGGCCATAGGAATCAATTACAAGGTCCACAGCACAGAAACAACAAAACAACCTTTTAAAATCTTCAACAAACCTCCAAAACCAGAAAATGAAGCAAAAGCTGAACAATGGCCAAGTAGTGGAGTTAAGCATGTTCTCAAGGATGTTAATTGCATAGCCAAGCCATGTGAAATTCTTGCAATTGTTGGGCCAAGTGGAGCAGGAAAATCATCACTGCTTGAGATTCTTGCTGGTAGAGTTAGTCCACAAAATGGTGGTTCTATCTTGGTGAATCAAGAGCATATAGATAAATCTCAGTACAGAAAAATTTCAGGGTATGTTACACAAAAGGATACCCTTTTTCCCTTACTTACAGTTGAAGAAACCATGATGTTTAGTGCAAAACTAAGGCTAAATCTTCCTCATGAAAAACTATGCTCCAAGGTTAAGTCTCTGATTCAAGAGCTTGGTCTTAGTCATGTTGCTAGGACTAGAGTAGGAGATGGAGATGACAGGGTTCGTGGAATATCCGGTGGTGAGAGGCGCCGAGTTTCCGTTGGTGTTGAAGTCATACATGATCCAAAAGTGTTGATTCTTGATGAAGCAACTTCAGGTCTTGACAGTACCTCAGCTTTGCAAATAATTGGTATGCTTAAAGTCATGGCTGAATCTAGGGGAAGAACTATAATACTAAGTATTCATCAACCTGGGTTTGGGATAGTGAAGTTGTTTAATTCAATACTGTTGTTAGCCAATGGCAGTGTGTTACATCATGGTAGTGTGGATCTGTTGGATGTGAATCTAAGGTTGATGGGTTTAGAGCTTCCTCTTCACGTTAATGTTGTTGAGTTTGCTATGGAATCCATTGAGACCATTCAGCAACAACAGCAAAAAAGTCAGCAAGTTCAGGTCGAAGCACCAAAACAATTACTAGGGACAATGCGACAAAAGAAAGCTGATGATCAAGGTGAAAGTAGAAGTGGTAAGTTTACTCTACAACAGCTATTTCAACAATCCAAGGTATTTGACATAGAAAACATGAATGTAGGAATGGATTTCTCTTGTCATCATGCTAATTCTAGATTGAGAGAAACTGTGATTCTTGCTCATAGGTTCTCCAAAAACATAATTCGTACAAAAGAGCTGTTTGCATTCAGGATAATTCAGATGCTGATTTCTGGGCTGATTTTGGGATCCATCTATGGTAATCTCAAAGATGGTATAGTGGGAGCAGAACAAAGGGTTGGTCTATTTGCTTTCATATTAACGTATTTGTTATCAAGCACCATTGAAGCTCTGCCAATTTTTCTGCAAGAAAGGGAGATTCTGATGAAGGAGATTTCAAGTGGAAGCTACAGAGTTTCATCCTATGCTATTGCTAATGGCCTAGTTTACTTGCCATTTCTACTCATACTAGCCATTTTATTCGCAGTGCCACTATACTGGCTTATCGGTCTCAACCCAAATTTCACGGCATTTTTGCACTTTCTGTTGCTAATATGGCTGATTTTGTATACCGCGAATTCGGTTGTGGTATGTTTCAGTGCTCTGGTGCCTAATTTCATCGTTGGAAATTCATTAATCGCCGGTGTCATGGGTTCATCTTTTTTGTTCTCTGGTTACTTCATATCCAATCATGAAATTCCGAAGTACTGGATTTTCATGCATTATTTGTCTCTATTTAAGTATCCTTTCGAAGGGTTTCTAATCAATGAGTTCTCCAACTCAAAGAAGTGCTTGGAGTACATGTTTGGGGCATGTGTAATGAGGGGAGAGGATGTACTTAAAGAAGAAGGGTATGGAGGTGAGAGTAGTAGATGGAAGAATGTTGGGGTGATGGTGTGCTTCATCTTTGTTTATAGATTCATTTCTTATGTAATTCTCAGATACAGATGCTCACAGAGTGTCACCTTCTGA 1920 0.3922 MKKQWCEIEAIGINYKVHSTETTKQPFKIFNKPPKPENEAKAEQWPSSGVKHVLKDVNCIAKPCEILAIVGPSGAGKSSLLEILAGRVSPQNGGSILVNQEHIDKSQYRKISGYVTQKDTLFPLLTVEETMMFSAKLRLNLPHEKLCSKVKSLIQELGLSHVARTRVGDGDDRVRGISGGERRRVSVGVEVIHDPKVLILDEATSGLDSTSALQIIGMLKVMAESRGRTIILSIHQPGFGIVKLFNSILLLANGSVLHHGSVDLLDVNLRLMGLELPLHVNVVEFAMESIETIQQQQQKSQQVQVEAPKQLLGTMRQKKADDQGESRSGKFTLQQLFQQSKVFDIENMNVGMDFSCHHANSRLRETVILAHRFSKNIIRTKELFAFRIIQMLISGLILGSIYGNLKDGIVGAEQRVGLFAFILTYLLSSTIEALPIFLQEREILMKEISSGSYRVSSYAIANGLVYLPFLLILAILFAVPLYWLIGLNPNFTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSLIAGVMGSSFLFSGYFISNHEIPKYWIFMHYLSLFKYPFEGFLINEFSNSKKCLEYMFGACVMRGEDVLKEEGYGGESSRWKNVGVMVCFIFVYRFISYVILRYRCSQSVTF* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3164 639 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
Tpr3g3164 639 Gene3D - 43 320 IPR027417 -
Tpr3g3164 639 Pfam ABC-2 type transporter 235 310 IPR043926 GO:0140359
Tpr3g3164 639 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 278 IPR003439 GO:0005524
Tpr3g3164 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 631 - -
Tpr3g3164 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 264 IPR027417 -
Tpr3g3164 639 SMART AAA_5 63 395 IPR003593 -
Tpr3g3164 639 Pfam ABC transporter 54 205 IPR003439 GO:0005524
Tpr3g3164 639 Pfam ABC-2 type transporter 367 574 IPR013525 GO:0016020|GO:0140359
Tpr3g3164 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3164 Tpr-Chr3 34846765 34848684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3164 59 265 Calmodulin-binding Proteins AT2G36910 26.267 1.06e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3164 K05681 - gmx:121172640 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3164 3 34846765 34848684 Tpr3g3164 3 34846765 34848684 ECH