Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3162 ATGGGAGATAAAGGAAATAAAACAGATGAATATATAGTGTGTTATGCACCAACCATGATAACAACAAATGGAATATGGGAAGGAGATAACCCTTTGGATTATTCTCTCCCACTTTTCATCTTGCAATTAACCTTAGTTGTTGCAGCCACTCGAATATTCGTCTTTCTTCTCAAGCCCTTTCGCCAGCCACGCGTCATAGCCGAAATTCTGGGAGGAGTAATGTTAGGTCCTTCGGTACTCGGAAAAAACAAAACATTCGCCAATGCAGTGTTTCCTCTAAGAAGTGTGATGGTGATTGAAACAATGGCAAATGTTGGTCTTCTTTATTTTCTGTTCTTGGTTGGTGTGGAGATGGACATAACCATTTTGCGCAGCGTAGGTAAAAAGGCAGTCACTGCAGCAATTGCCGGCATGATTTTGCCTTTCATCCTTGGTGGTGCTTGTGCCGTCCTTTTAAATGATAAAAAAAACAGTGAGATGAACCAAGGAACTTATATTCTGTTCATCGGTGTCGCTCTTTCTGTCACTGCATTTCCTGTTCTAGCTAGGATCCTTGCTGAGCTAAAACTTATTAACACGGATTTAGGAAGGCTTGCTCTTTCATCTGCACTCATTAATGATGTTTGTGCTTGGATTCTCTTGGCTTTAGCAATTGCCATGGCTGAGAATGAAACAAGTTCTTTTACTTCCCTTTGGGTTTTATTGTCCGGCGCAGCGTTTGTCGCCTTTTGTGTTTATGCCGTTAGACCAGCAGCCTCATGGATTGTTAAGAAAACACCCGAAGGAGAATCTTTTAGTGAATTCTATATATCTCTTATATTAGCCGGTGTCATGGTCTCCGGTTTCATCACAGATGCTATTGGAACTCATGCTGTTTTCGGAGCTTTTGTGTTTGGTTTGGCGATCCCGAGTGGACCGCTCGGTGTTACTCTTGTGGAAAAGCTTGAGGACTTTGTTTCAGGACTTTTGCTCCCTCTATTTTTCGCCATCAGCGGACTAAAAACCAATATAGGACTTGTTCAAGGTTCTCACACTTGGACTATTATTATTGTTGTCATTTTTCTTGCTTGCATTGGCAAAATTGTTGGAACTCTAGCTGTTGCAATATTTTATCAAATGCCGATTCGCGAAGGCGCTACGCTCGGTTTACTCATGAACACAAAAGGCCTTGTTGAAATGATTGTGCTGAATGTTGGAAAGGACCAAAAGATTTTTGATGAAGAATCATTTGCAGTGATGGTGGTTATAACATTATTAATGACAGGAATAATTGTACCTTTTGTATCAATAATTTATAGACCATCAAGGAGAAACATATATTACAATAGAAGAACACTTCAGATATTAAAACCAGATGCAGAATTTAGAGTACTAGTTTGTGTACATAGTCCTCGAAACGTGCCAACAATGATCAACCTCATTGAAGCCTCGAATCCAACAAAGGGGTCGCCAATATGTGTCTATGTGCTCCATTTGGTCGAACTTAGCGGTCGAACATCAGCGATGCTCATTGTTCACAACACCAATAAACCAGAACATGCGGCACTTAACCGAACTGAAGCTCAATCCGACCACATAATCAACGCATTTAAAAACTACGAACAACACACATCCTATGTCTCGGTCCACCCCTTAACAGCAATGTCCCCTTACCCAACAATGCACGACGATATATGCAATTTGGCAGAAGACAAACGTGTATCACTAATAATCGTTCCGTTTCATAAACAACAAACAGTTGATGGTGGAATGGAAACAATAAACGTGGCGTTTCGAACAATCAACCAAAATGTACTAGCAAATGCACCTTGCTCTGTCGGAATTCTAGTTGATAGAGGCTTAAGCGGTTCGAACCGATTAGTCTCAAATCAAACATCACATCACGTAGCTGTTATGTTTTTCGGTGGTCCAGACGACAGAGAAGCGTTATGCTACGGATGGAGAATGTTGGAACATACTGGTATAAACCTAACGTTAATGCGATTTGTCCCAGGAGAACAAGTAAGCAGACCGGTTCGACAACAACATGGATCCGGTTTAGATGGACCAAGTGTGGTAACAGTTGAAACAGAAAATGATATAGATAAACTACTTGATGATAAACTAATAAATGAGTTTAGGATGAGATATGGGAATGATAATTCAGTTGATTATTTAGAAAAAGTAGTTAACAATGGAGAGGAAACAGTTGCAGTAATAAGAACAATGGATGATATTCATGATCTTTTCATTGTTGGAAGAGGTCAAGGAATGATATCACCATTGACAGCAGGACTTACTGATTGGAGTGAGTGTCCTGAAATGGGTGCAATTGGTGATTTATTAGCTTCTTCAGATTTTGCAGCAACTGCTTCAATTTTAGTAGTTCAACAATATGTTGGAACAGGTTCAAATGATGATGGATTAGAAACACCAAATGGTTATGGTGGTGATGAATATAATAATAATGTTGACATAAATCATCATTCTGCACCACCAAGAGGACAAACTGTTTTTAATACAGACAGAATCAGTCCTCATAATTTGTAA 2529 0.3966 MGDKGNKTDEYIVCYAPTMITTNGIWEGDNPLDYSLPLFILQLTLVVAATRIFVFLLKPFRQPRVIAEILGGVMLGPSVLGKNKTFANAVFPLRSVMVIETMANVGLLYFLFLVGVEMDITILRSVGKKAVTAAIAGMILPFILGGACAVLLNDKKNSEMNQGTYILFIGVALSVTAFPVLARILAELKLINTDLGRLALSSALINDVCAWILLALAIAMAENETSSFTSLWVLLSGAAFVAFCVYAVRPAASWIVKKTPEGESFSEFYISLILAGVMVSGFITDAIGTHAVFGAFVFGLAIPSGPLGVTLVEKLEDFVSGLLLPLFFAISGLKTNIGLVQGSHTWTIIIVVIFLACIGKIVGTLAVAIFYQMPIREGATLGLLMNTKGLVEMIVLNVGKDQKIFDEESFAVMVVITLLMTGIIVPFVSIIYRPSRRNIYYNRRTLQILKPDAEFRVLVCVHSPRNVPTMINLIEASNPTKGSPICVYVLHLVELSGRTSAMLIVHNTNKPEHAALNRTEAQSDHIINAFKNYEQHTSYVSVHPLTAMSPYPTMHDDICNLAEDKRVSLIIVPFHKQQTVDGGMETINVAFRTINQNVLANAPCSVGILVDRGLSGSNRLVSNQTSHHVAVMFFGGPDDREALCYGWRMLEHTGINLTLMRFVPGEQVSRPVRQQHGSGLDGPSVVTVETENDIDKLLDDKLINEFRMRYGNDNSVDYLEKVVNNGEETVAVIRTMDDIHDLFIVGRGQGMISPLTAGLTDWSECPEMGAIGDLLASSDFAATASILVVQQYVGTGSNDDGLETPNGYGGDEYNNNVDINHHSAPPRGQTVFNTDRISPHNL* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3162 842 Pfam Sodium/hydrogen exchanger family 45 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr3g3162 842 PANTHER CATION/H+ EXCHANGER 3 8 827 - -
Tpr3g3162 842 Gene3D - 38 438 IPR038770 -
Tpr3g3162 842 PANTHER CATION/H + ANTIPORTER 8 827 - -
Tpr3g3162 842 MobiDBLite consensus disorder prediction 823 842 - -
Tpr3g3162 842 Gene3D - 479 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3162 Tpr-Chr3 34824356 34827849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3162 7 806 Antiporter Super Family AT2G13620 67.706 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3162 - - gmx:100818927 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3162 3 34824356 34827849 Tpr3g3162 3 34824356 34827849 ECH