Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3156 ATGAATCTCCCTTCTCTCACATTCACCCGTTATCCCCCTCACCATCTTGTTTCTCCTCTCTATTCTAAACTTCCCAAAGCCACTGCAAGGGGAAAAAGTGTCGATAGTGTTGCAATTGAAGCTCGTAATCTGAATTTCTCATTCACTGCAAAGCAAACCAAGGATGTGACTGTTCTTAGAGATTGTTCGATTCGCATTCCTTCTGGGCAATTTTGGATGCTTCTTGGTCCCAATGGATGTGGAAAATCAACACTTTTGAAAATTTTGGCTGGTTTGTTGATTCCAACTTCAGGAACAGTATATGTGAATGGACCTAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTGATGCCTACCGTAGATTCTGATGTTGCATTTGGTCTTGGTAAAGTTAATTTGGCTGATGATGAAGTCAGATCTAGGGTGTCACAAGCTTTACATGCTGTTGGTTTATCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTCTAGCAGAAGCTTGTAAGGTTCTGTTGTTGGATGAGCTCACAACTTTCCTAGATGAAACTGACCAGGTTGGAGTTATCAAAGCTGTTAGGAACTGTCTGGATACTTCTGAAGAAGTTACAGCATTATGGGTCACCCATCGTTTGGAAGAACTAGAGTATGCAGATGGTGCAATCTACATGGAGGATGGAAAGGTAGTCATGCATGGTGATGCGACAAAAATACGGAGTTTCATTGAAGACAGACAATCTGCCTATATTAACCAGATTAATTCTTAA 807 0.4164 MNLPSLTFTRYPPHHLVSPLYSKLPKATARGKSVDSVAIEARNLNFSFTAKQTKDVTVLRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLIPTSGTVYVNGPKSFVFQNPDHQVVMPTVDSDVAFGLGKVNLADDEVRSRVSQALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNCLDTSEEVTALWVTHRLEELEYADGAIYMEDGKVVMHGDATKIRSFIEDRQSAYINQINS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3156 268 Pfam ABC transporter 59 191 IPR003439 GO:0005524
Tpr3g3156 268 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 28 267 - -
Tpr3g3156 268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 256 IPR027417 -
Tpr3g3156 268 SMART AAA_5 68 241 IPR003593 -
Tpr3g3156 268 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 28 267 - -
Tpr3g3156 268 Gene3D - 34 267 IPR027417 -
Tpr3g3156 268 ProSitePatterns ABC transporters family signature. 164 178 IPR017871 GO:0005524
Tpr3g3156 268 CDD ABC_cobalt_CbiO_domain1 40 241 IPR015856 GO:0005524|GO:0016020|GO:0055085
Tpr3g3156 268 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 264 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3156 Tpr-Chr3 34772694 34776809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3156 39 251 Calmodulin-binding Proteins AT2G36910 29.870 3.18e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3156 - - gmx:100813654 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3156 3 34772694 34776809 Tpr3g3156 3 34772694 34776809 ECH