Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3150 ATGCCCACCTGGTGGGGTAAAAAATCAACCAAGTCCAAGGACCTTGAGTCACGTGGCGGCGGCAGCAGCGGCAGCAGCAGCAGCAGCAACGGCGGTGGTGTGCTTCATTTCAATTTCAACAAATCTCCGATCAGAAACGGTTATTATAATAACATTAATAATAAACATGAAAACCCTAACGATGGTTTGAATTTTAGAAATTCTCCCAGATCCAGTAGAGATTTCACTCCTTCGAGTGATTCGATAGGGCTTCCTTTGCCTCGTCCTTCTGTTTCTTCTACACAAAGTTTCAGCAATGATCAGGGGAATACTATTACTTTTGGATCTGCTTCTGTTTCTGGTGGTTCTAGCATTAGCTCCAATGCTTCTTCTGATGATCCTTCAACTTCTAATTCTCAGATTAATACCGCTAGCGCTAGAGGACAATGTGAAGCAAAGTTCAATGTGAGGCCTAAAAGCCCGGGTCCTGGGTTAAGAGGGCCTACCAGTCCAACATCACCTCTTCATGCAAGGTTGCATGTTTTGAGTCTCGACTCACCTACAGGCAGGCAAGAAGATGGAAGGAGTGAATGTCATCCATTGCCTCTTCCACCAGGCTCTCCAACTAGTCCTTCTCTTCCAAACAGCACAAGACCAAATGGACTGCTAGAAAACAGTACTGCTAATCGTGGCAGGTGGAAGAAAGGAAAACTTCTAGGTCGGGGAACATTTGGGCATGTTTACTTGGGATTCAATAGTGAAAGTGGACAATTGTGTGCAATAAAAGAAGTCAGGGCTGTCGGCGATGATCAAACCTCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATAGATTTGCTGAGTCAGCTTTCACATCCAAACATTGTTCAATACCATGGAAGTGATATGGGAGAAGAAACACTTTCCGTGTATTTGGAATATGTCTCTGGAGGTTCCATTCATAAATTACTTCAGGAATATGGGTCCTTCAAGGAGCCTGTTATCCAAAATTATACCAGGCAGATTCTCTCTGGACTTTCCTATCTTCATTCGAGAAATACAGTGCATAGGGATGTTAAAGGGGCGAACATACTAGTTGATCCTAATGGTGAAATCAAGTTGGCGGACTTTGGAATGGCGAAACATATAAATTCTTCTTCCTCGATGCTTTCTTTCAAAGGAAGTCCACACTGGATGGCGCCAGAGGTTGTAATGAATTCAAATGGCTATAGTCTTCCTGTTGATATTTGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCAAAGCCTCCTTGGAGTCAGTATGAAGGGGTGGCTGCAATATTTAAAATTGGTAACAGCAAAGACATGCCTGAAATTCCCGACCATCTCTCAAATGATGCAAAGAATTTCATTAAGCTATGCTTGCATAGAGATCCTTCAACTCGCCCTACAGCCCAAATGTTACTAAATCACCCCTTCATTCGAGATCAGTCAGCAACAAAAGCTGCTAATGTCAGAATAACCAGGGATGCTTTTCCATACATGTTTGATGGAAGCCGGACGCCGCCAGCTTCAGATCTTCATTCCAATCGAACTTGTATTGCTGCTTCTCAGGATGCAGATTATGCAACAAAAACAGTTGTTGCAGCTTCACGAACACCAAGGAGCCCAAGAGACAACACAAGGACGATCACATCTTTGCCTGTATCTCCGTGTTCAAGTCCATTGCGACAGCATGGTCCTGCTCACAAGAGCTGTTTCCTCTCTCCTCCTCATCCAAGTTATACAATGATGGGACAAAAGCCCCTTGTTTCATATGAATCATATCCAATGAGATCAAATACCAAGTTTACTCTTGATCCTTGGCATGAAACACATATGTACAAAGCCCACACACCTGTTGGATCCCCAAGAAGATTTATTTGA 1890 0.4339 MPTWWGKKSTKSKDLESRGGGSSGSSSSSNGGGVLHFNFNKSPIRNGYYNNINNKHENPNDGLNFRNSPRSSRDFTPSSDSIGLPLPRPSVSSTQSFSNDQGNTITFGSASVSGGSSISSNASSDDPSTSNSQINTASARGQCEAKFNVRPKSPGPGLRGPTSPTSPLHARLHVLSLDSPTGRQEDGRSECHPLPLPPGSPTSPSLPNSTRPNGLLENSTANRGRWKKGKLLGRGTFGHVYLGFNSESGQLCAIKEVRAVGDDQTSKECLKQLNQEIDLLSQLSHPNIVQYHGSDMGEETLSVYLEYVSGGSIHKLLQEYGSFKEPVIQNYTRQILSGLSYLHSRNTVHRDVKGANILVDPNGEIKLADFGMAKHINSSSSMLSFKGSPHWMAPEVVMNSNGYSLPVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPDHLSNDAKNFIKLCLHRDPSTRPTAQMLLNHPFIRDQSATKAANVRITRDAFPYMFDGSRTPPASDLHSNRTCIAASQDADYATKTVVAASRTPRSPRDNTRTITSLPVSPCSSPLRQHGPAHKSCFLSPPHPSYTMMGQKPLVSYESYPMRSNTKFTLDPWHETHMYKAHTPVGSPRRFI* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3150 629 MobiDBLite consensus disorder prediction 117 168 - -
Tpr3g3150 629 SMART serkin_6 226 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3150 629 CDD STKc_MEKK1_plant 225 482 - -
Tpr3g3150 629 MobiDBLite consensus disorder prediction 206 220 - -
Tpr3g3150 629 ProSiteProfiles Protein kinase domain profile. 226 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3150 629 MobiDBLite consensus disorder prediction 70 100 - -
Tpr3g3150 629 ProSitePatterns Protein kinases ATP-binding region signature. 232 255 IPR017441 GO:0005524
Tpr3g3150 629 Gene3D Transferase(Phosphotransferase) domain 1 223 503 - -
Tpr3g3150 629 SUPERFAMILY Protein kinase-like (PK-like) 223 566 IPR011009 -
Tpr3g3150 629 MobiDBLite consensus disorder prediction 196 221 - -
Tpr3g3150 629 MobiDBLite consensus disorder prediction 16 34 - -
Tpr3g3150 629 Pfam Protein kinase domain 227 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3150 629 PANTHER MAP KINASE KINASE KINASE 1 612 - -
Tpr3g3150 629 MobiDBLite consensus disorder prediction 117 142 - -
Tpr3g3150 629 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 612 - -
Tpr3g3150 629 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3150 Tpr-Chr3 34734498 34740537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3150 1 546 MAP Kinase Kinase Kinase AT1G53570 55.732 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr3g3150 Pkinase 5.9e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3150 K04421 - gmx:100813122 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3150 3 34734498 34740537 Tpr3g3150 3 34734498 34740537 ECH
Tpr3g0820 3 7697408 7702553 Tpr3g3150 3 34734498 34740537 PCT
Tpr3g0637 3 6255885 6262432 Tpr3g3150 3 34734498 34740537 PCT