Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3137 ATGGTCTTTTTTTGGTTGCAACTTCAAGCATCTACTGATCAAGAATTGAACCAAGAAATTCCTCATTTCAATCTACCATCGAAGATTTTATGCCGTGTTGTTAAGGTTCAGTTGCTGGCTGAGCAAGAAACTGATGAGGTTTATGCTTATCTTGCTTTGCTTCCAGAATCAGATATATGTGACGCAGTTGCTGTGGCTGGATTACTAAATGCAACTCTTGTTATTCCAATATTTCATTTAAATAGTGTATGGAGAGATTCAAGGATAAAGAAACTGGCCACTGGAGATTCAGCTGCATCTTGTCCTTTCCATGGAGGTCTATTCTTTCCGCAACTGGATACAGAATATTACTTTTATGCCCAATCAGGAAACGTATGCAGGCGTGCGGAGCATTGGAATGTTCCAAAATCGGCTTTGTTCAAGCAAATTCTAAGGCCTGGCAAGGGATTTGGCTTAAGAGATTATGTGACTAGGTGGTTGAATCCAGTGTCATTAAATTTACAAAGATTTTGTGGCAATGCCAACGTTTCGTTATACACACCTAAACCTGTGTGA 555 0.3964 MVFFWLQLQASTDQELNQEIPHFNLPSKILCRVVKVQLLAEQETDEVYAYLALLPESDICDAVAVAGLLNATLVIPIFHLNSVWRDSRIKKLATGDSAASCPFHGGLFFPQLDTEYYFYAQSGNVCRRAEHWNVPKSALFKQILRPGKGFGLRDYVTRWLNPVSLNLQRFCGNANVSLYTPKPV* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3137 184 PANTHER AUXIN RESPONSE FACTOR 11 8 61 - -
Tpr3g3137 184 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 8 61 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3137 Tpr-Chr3 34590324 34594818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3137 7 64 B3 DNA Binding Superfamily AT1G59750 56.897 4.18e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3137 K14486 - gmx:100795763 94.7449