Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3121 ATGAGTTTGGCGGACACCGAATCCTCAGAGGAAGGTTCGGGGCTTCTTGAGCCTCCTGATCCTGATGTTATTGAAATTGATCCTACTAGTCGTTACCTTAGGTACAAGGAAGTAATTGGCAAAGGAGCTTTCAAGACTGTTTATAAGGCATTTGATGAAATCACGGGGCTTGAAGTTGCGTGGAGTCAAGTTCGGATCGATGAGGTATTACAATCACCAGGTGACCTTGAAAGGCTGTATTCAGAAGTGCATCTGTTGAGGTCATTGAAGCATAGTAACATTGTAAGGTTCTACAATTCATGGATTGATGACAAGCACAGGAGTGTTAACATGATTACTGAGTTGTTCACCTCAGGGAGCCTCAGACAGTACCGTAGGAAACACAAGAAGGTTGATATGAAAGCTGTTAAAGGATGGGCAAGACAGATTTTAATGGGTTTAATCTACCTCCACAATCACAACCCACCTATTATACACAGAGATCTCAAGTGTGATAACATATTTATAAATGGTCACCAAGGAGAAGTTAAGATCGGAGATTTGGGTTTGGCAACTCTCTTGAAGCAGAATAATGCCAAGAGTGTAATTGGAACCCCGGAATTTATGGCGCCTGAACTGTACGATGAAAGTTATAATGAATTAGCTGACATATATTCTTTTGGGATGTGCATGCTGGAGTTGGCTACTTCTGAGTATCCTTACAGAGAATGTAGAAACTCTGCTCAGATATACAAGAAAGTTTCATCTGGCATAAAGCCAGTTTCTCTTTCTAAAATCAAAGATCCAGAAATAAAATCATTTATTGAGAAATGTCTTGTCCCAGCATCTCAAAGATTGTCAGCAAAGGAGCTTCTGATGGACCCTTTTCTTGAAGTGAATGTTTCATTAAAGAATCGTCCTCTTCCATTACCAGATATTGTTCTTCCTAAATACGGAGGCTTTGAAAATCGTTGTCTGATGTCGGAAGGTCCTGCTAGTGCACGTATTGGATCCATTTCAATGGATCTTGGAGATACCAGTGAGCAACCATTGATCACTGTGTTTTATAATTCTAACGATGATGCACCACCTTCTCCATGTGTTGAGATACGAAGGTTGATGGGAGGTGATAGATTTTTTCTCAAAGGTGAAGAAAATGACGTAAATTCTGTATCATTAGTTCTCCGGATAACTAATCAAGGCGGGCGAGCAAGAAATATCCATTTCATATTCTACCTCGATACTGATACGGCCATCTCAGTGTCAAGTGAAATGGTTGAGCAACTTGAACTTACCGAGCACAATGTTAAATTCATTGCCGAGTTGATTGATTTGTTATTGGCAACATTGGTTCCTGATTGGAAACCTTGTGTAGCGATTGATCACTTAATTTCTCCAAATGGTAAACGAACTCCTCTAAACCTACTGAAACAAGACTCGCAATTGGCAAGATACAAAATAAGTTCAGTGGATTCTAGCGAAATTGTGGCTGAATATTTAGGTCCCTCAACCTCACATGACAGATTGGCTGAAAAAGAAAACAGCGATAATATGATTTTTTATGATGTTCTATCCCATGCAAACATTGGTTTCCAAAGAACAACGAAGACAGATGATATGTATTCTGCGACATCTTATGCTTCAGCAACATCTGACTTCAATGATAAGAATTATTCTACAGTTTCATTCGTGTCTGCTAACTCAGGATACACAGATTTCAGCTTACCTACAGTGAATGGATGGAGTCAATCCTCACTTGCATCTGAAATTGGGCAATCCTCTGATAGAAAGAGCAAGGTTCCGTGCTTGGAAAGCAACAATTGTCCCCTTAGTACTTCTTCATTGTATGAAACTGAGGATGAGTTGAGAATAGAGTTAGAGAAGATTGAACGGCAATATCAAGAGGCAATAAAAGATTTATCCAAAAGAAGATGTGATGCCATCATGGAGACCAGAAAGAGGCTGTCACTAAAAAATACAGTCATAGAATAA 1971 0.3952 MSLADTESSEEGSGLLEPPDPDVIEIDPTSRYLRYKEVIGKGAFKTVYKAFDEITGLEVAWSQVRIDEVLQSPGDLERLYSEVHLLRSLKHSNIVRFYNSWIDDKHRSVNMITELFTSGSLRQYRRKHKKVDMKAVKGWARQILMGLIYLHNHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATLLKQNNAKSVIGTPEFMAPELYDESYNELADIYSFGMCMLELATSEYPYRECRNSAQIYKKVSSGIKPVSLSKIKDPEIKSFIEKCLVPASQRLSAKELLMDPFLEVNVSLKNRPLPLPDIVLPKYGGFENRCLMSEGPASARIGSISMDLGDTSEQPLITVFYNSNDDAPPSPCVEIRRLMGGDRFFLKGEENDVNSVSLVLRITNQGGRARNIHFIFYLDTDTAISVSSEMVEQLELTEHNVKFIAELIDLLLATLVPDWKPCVAIDHLISPNGKRTPLNLLKQDSQLARYKISSVDSSEIVAEYLGPSTSHDRLAEKENSDNMIFYDVLSHANIGFQRTTKTDDMYSATSYASATSDFNDKNYSTVSFVSANSGYTDFSLPTVNGWSQSSLASEIGQSSDRKSKVPCLESNNCPLSTSSLYETEDELRIELEKIERQYQEAIKDLSKRRCDAIMETRKRLSLKNTVIE* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3121 656 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3121 656 CDD STKc_WNK 31 290 - -
Tpr3g3121 656 SUPERFAMILY Protein kinase-like (PK-like) 34 336 IPR011009 -
Tpr3g3121 656 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Tpr3g3121 656 Gene3D - 382 450 - -
Tpr3g3121 656 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 652 - -
Tpr3g3121 656 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3121 656 Coils Coil 612 639 - -
Tpr3g3121 656 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 384 437 IPR024678 GO:0004674|GO:0005524
Tpr3g3121 656 Gene3D Transferase(Phosphotransferase) domain 1 116 297 - -
Tpr3g3121 656 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 652 - -
Tpr3g3121 656 MobiDBLite consensus disorder prediction 1 21 - -
Tpr3g3121 656 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3121 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3121 Tpr-Chr3 34312851 34318015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3121 133 459 MAP Kinase Kinase Kinase AT1G49160 69.725 8.19e-166 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr3g3121 Pkinase 8.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3121 K08867 - gmx:121175054 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3121 3 34312851 34318015 Tpr3g3121 3 34312851 34318015 ECH
Tpr3g0844 3 7968894 7972501 Tpr3g3121 3 34312851 34318015 PCT