Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3118 ATGGAATGTGATTGTGATTTCGAAGGAAAATTGGTAGGAGAAGGAAACAAGAAAAGCTACTACTATCTTTTAAAATCCAAAATCGGAGAAGGTTCTTCCTCCACAGTCTGGATAGCTGAACAAAGACCCACCGGTAAAGATGTAGCGGTCAAGCAAATCTTCCTCTCCAAACTCAACTCTCGCCTCAAAGCTTCATTGGACTGTGAGATCAATTTTTTATCCTCCGTTAACCATCCCAATATTGTTCACCTTCTTCACTTCTTTCAGGGTGATGGATGTGTTTACTTGGTTCTTGAGTTTTGTGCTGGAGGGAATTTAGCTTCTTATATTCGTTGCCATGGAAGAGTTCAACAACTAACCGCTAAAATATTCATGCAACAACTTGGATCTGGTCTAAAAGTACTACGTTCTCATGGCATTATTCATAGAGACTTAAAACCCGAGAACATTTTGCTATCAAGTCACAGGGCCAATGCAGTGCTAAAGATATCTGATTTTGGTCTCTCAAGAACTGTACGCCCTGGTGAGTATGTTGAGACAGTTTGTGGAACTCCATTATACATGGCTCCTGAAGTTCTTCAGTTCCAAAAATATGATTACAAGGCAGACATGTGGAGTGTTGGGGCAATTCTTTTTGAGCTTCTAAATGGTTATCCACCTTTTAATGGTAGAAATAATGTTCAGGTGTTGAAAAACATCAGATCCTGTACCTCTCTTCCATTTTCTCAATTGATTCTTTCAGGATTGGATCCTGCTTGTCTTGATATTTGTTCAAGACTACTATGCTTAAATCCAGTGGAGCGCCTTTCTTTTGATGAATTTTATTTGCATAGCTTTCTACGAGGAAAATCATCGGGACCTTGA 864 0.3935 MECDCDFEGKLVGEGNKKSYYYLLKSKIGEGSSSTVWIAEQRPTGKDVAVKQIFLSKLNSRLKASLDCEINFLSSVNHPNIVHLLHFFQGDGCVYLVLEFCAGGNLASYIRCHGRVQQLTAKIFMQQLGSGLKVLRSHGIIHRDLKPENILLSSHRANAVLKISDFGLSRTVRPGEYVETVCGTPLYMAPEVLQFQKYDYKADMWSVGAILFELLNGYPPFNGRNNVQVLKNIRSCTSLPFSQLILSGLDPACLDICSRLLCLNPVERLSFDEFYLHSFLRGKSSGP* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3118 287 SUPERFAMILY Protein kinase-like (PK-like) 20 282 IPR011009 -
Tpr3g3118 287 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Tpr3g3118 287 Gene3D Transferase(Phosphotransferase) domain 1 14 287 - -
Tpr3g3118 287 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 27 276 - -
Tpr3g3118 287 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Tpr3g3118 287 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 27 276 IPR045269 GO:0004674|GO:0006914
Tpr3g3118 287 Pfam Protein kinase domain 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3118 287 SMART serkin_6 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3118 287 ProSiteProfiles Protein kinase domain profile. 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3118 Tpr-Chr3 34302062 34304826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3118 22 282 CBL-interacting serine-threonine protein kinases AT2G30360 37.175 1.45e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Tpr3g3118 Pkinase 2.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3118 - - lja:Lj1g3v1289070.2 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3118 3 34302062 34304826 Tpr3g3118 3 34302062 34304826 ECH