Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3109 ATGATTATGAAAGGAAAAAAGCCATATGTGGTTGTGTTTGTGATACAAACTATATATGCAGCTATGTTTCTACTCTCCAAAGCTGCATTTGATCATGGCATGAACAATTTCATCTTTGTTTTCTATAGACAAGCATTAGCAACCATTTTCCTCATACCTTTTGCTTTCATCTTCGAATGGAAAATTGCACCCCCTTTGTCTTTCAGGACCTTCTGCAAGATTTTCTTCCTTTCTCTCTTCGGCATTACGTTGAGCTTGGATATAAATGGTATTGGTTTGATTTACACCTCTCCAACTTTGGCAGCTGCTACCACAAATTGTCTTCCAGTTATCACCTTCTTTTTAGCACTCATACTTAGGGTTGAAAGTTTGAAAATAAAAACACGAGCTGGGATTGCTAAGTTGATTGGCATTGTGGCATGTTTGGCTGGTGCATCTACCCTAGCCTTTTATAAAGGTCCTCATTTAAAGCTTTTAAGCCATCACATTCTTGGATCCAATAAACAACATGATCAAAGTCATATTCCATCTAGTACATGGATAAAAGGTTGTTTCCTCATGTTGCTCTCCAACACACTTTTTGGTCTATGGATGGTGTTACAGGCTTTTGTAATAAAAGACTACCCGCCAAAGCTGATCTTTACAACTCTTCAGTGTTTTTTAAGCTCAATTCAATCTTTAGTTATCGCCTTGGCCATAGAAAGGGACATTGAGAAGTGGAAATTGGGTTGGAATATCAATCTTCTTGCTGTAGCTTATTGTGGAATTATTGTGACAGGGGTGACATATTACTTAATGACATGGGTTATAGAGAAGAAAGGACCTGTGTTTCTTGCCATGTCAACACCACTAGCTCTCATTATTACAATATTCTCCTCTGTAATTCTCTTGGGCGATATAATAAGTTTGGGAAGTGTTTTAGGTGGGTTCCTCTTAATTGTGGGACTATACAGTGTGCTGTGGGGAAAGAACAGAGAGCAAACACCAAAAGTTTCGCAAGATTTGGAACAACCATCAGTTTAG 1023 0.3822 MIMKGKKPYVVVFVIQTIYAAMFLLSKAAFDHGMNNFIFVFYRQALATIFLIPFAFIFEWKIAPPLSFRTFCKIFFLSLFGITLSLDINGIGLIYTSPTLAAATTNCLPVITFFLALILRVESLKIKTRAGIAKLIGIVACLAGASTLAFYKGPHLKLLSHHILGSNKQHDQSHIPSSTWIKGCFLMLLSNTLFGLWMVLQAFVIKDYPPKLIFTTLQCFLSSIQSLVIALAIERDIEKWKLGWNINLLAVAYCGIIVTGVTYYLMTWVIEKKGPVFLAMSTPLALIITIFSSVILLGDIISLGSVLGGFLLIVGLYSVLWGKNREQTPKVSQDLEQPSV* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3109 340 PANTHER WAT1-RELATED PROTEIN 9 328 - -
Tpr3g3109 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 151 - -
Tpr3g3109 340 PANTHER WAT1-RELATED PROTEIN 9 328 IPR030184 GO:0016021|GO:0022857
Tpr3g3109 340 Pfam EamA-like transporter family 8 138 IPR000620 GO:0016020|GO:0016021
Tpr3g3109 340 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Tpr3g3109 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3109 Tpr-Chr3 34208182 34213867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3109 1 254 Nodulin-like Gene Family AT5G64700 61.923 1.35e-97 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3109 - - gmx:100804562 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0858 3 8068882 8073102 Tpr3g3109 3 34208182 34213867 PCT