Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3108 ATGGGTGAAATAGGTCCATATTTGGCAGTGTTTATAATACAATTAATTTATTCTGGTATGACATTGTTGTCTAAGGCTGTGTTTAACGGTGGAATGAAAACTTCTGTGTTTGTTTTTTATAGACAACTTATTGGAGCCATTGTTATGGTCCCTCTAGCTTTGATATTTGAAAGGAAACAAGCTGTGCCAGTGACATTCTCATTTATGACCATATTCAAGATTTTTATGCTTTCATTATTGGGAATTACTTTAACTCTGAATGTGCATGGTCTTGCTCTTTCTTATACATCTGCTATGTTGGCTGCTGCAATTGTTAATTGCCTCCCTGCTTCTACATTCTTCTTTGCTGTTCTCCTCAGAATGGAGAAGGTAAATATAAGGACAAAATCTGGAATTTCAAAGATAGGGAGTGTATTATTGTGCATGGCTGGTGTAGCAATCCTTGCATTTTACAAGGGACCTCAGTTACAGGTTCATCATCTCCTATCTAGATATCATCACAACAATCAACAACATGAAGATCATTTTTCATATGACAAAAAATGGATTTTGGGTTCTTTACTCTTGTTCCTAGCTACCATCATGTGGAGTTTGTGGCTTGTACTTCAGGCTCAGTTACTTAAAAGTTACCCTTCAAAGCTAACATTCATGAGCATTCAGAGCTTATCAAGTGCAATTCAGTCATTTTTCGTTGCCATAGCTTTTGAAAGAGATATTGAGCAGTGGAAGTTGGGATGGAACATGAGACTGCTAGCAGTTGTTTACTGTGGGACACTAGTGACTGCAGTTGCATATTACCTGCAAGCACTAGTGATTGGTAAGAAAGGACCAGTTTTCCCTGCAACTTGGAATCCACTGAGCTTTATAATCGCTACCATTGGTTCTGTTTTGATCTTGGGAGAGACACTGTGTTTAGGAAGTGTTTTGGGTGGGATTCTGCTGGTTTTAAGTCTGTACACTGTTTTGTGGGCAAAAAGCAAAGAAGGAATCACTCATCAAAATTCTTTACCTATTCAAGCATATAAAGAATGTGCAGACCAGGTGAAAACAGATGTAGCATGTAGCAAACCACCGCAATGA 1080 0.3824 MGEIGPYLAVFIIQLIYSGMTLLSKAVFNGGMKTSVFVFYRQLIGAIVMVPLALIFERKQAVPVTFSFMTIFKIFMLSLLGITLTLNVHGLALSYTSAMLAAAIVNCLPASTFFFAVLLRMEKVNIRTKSGISKIGSVLLCMAGVAILAFYKGPQLQVHHLLSRYHHNNQQHEDHFSYDKKWILGSLLLFLATIMWSLWLVLQAQLLKSYPSKLTFMSIQSLSSAIQSFFVAIAFERDIEQWKLGWNMRLLAVVYCGTLVTAVAYYLQALVIGKKGPVFPATWNPLSFIIATIGSVLILGETLCLGSVLGGILLVLSLYTVLWAKSKEGITHQNSLPIQAYKECADQVKTDVACSKPPQ* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3108 359 Pfam EamA-like transporter family 7 133 IPR000620 GO:0016020|GO:0016021
Tpr3g3108 359 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Tpr3g3108 359 PANTHER WAT1-RELATED PROTEIN 5 337 IPR030184 GO:0016021|GO:0022857
Tpr3g3108 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 152 - -
Tpr3g3108 359 PANTHER WAT1-RELATED PROTEIN 5 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3108 Tpr-Chr3 34201844 34204532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3108 6 256 Nodulin-like Gene Family AT5G64700 52.941 1.47e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3108 - - vun:114162763 454.136