Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3107 ATGACAACATTTCTTCTCCGAAAGAATCTTCTATTTTTCACTTCTTCACATTCTACATTTCAACCTCGCACACTTCTTCTTCGCCTTCAACTCTGCGAGTTTTCATCTTCTCCCACTCCGTATTCTCACTGGAAGCGTCACGATGAAGAATCACGCAATGTTAGGGTTTCTGTTTGGTGGGATTTCGAGAACTGTAACATCCCTGCCGGTGTTAATGTTTCCAAAGTAGCACCTGCTATCACTGACGCCGTTAGAGCTAACGGAATTAAAGGTCCTGTTCATATTACTGCTTACGGCGATGTTTTGCAGCTTTCTAGACCTAATCAAGAAGCTCTCGCTTTCACTGGGATTCATCTTTCTCATGTTCCCAATGGTGGAAAGAATAGTGCTGATAGATCTCTTCTTGTTGATCTTATGTATTGGGTTTCCCAAAATCCTCCGCCTGCACATCTCTTTCTGATATCTGGTGATAGAGACTTTGCTGGCATATTACACCGATTAAGGATGAACAACTACAATATCTTGCTTGCAATTCCAGAAAAGGCTCCTGATGTTCTTTGTAGTGCAGCAACCATAATGTGGCAGTGGACTTCATTGCTCAAGGGAGAAAATCTAACTGGGAAGCATTTCAACCACCCTCCTGATGGTCAATTTGGTTCTTGGTATGGAAACTCTAAAGTGCCTCTTGAAAACCCCTTTTCAGCTGCCGAGCAGTCACCATCTTCACAAAAAGTACAAATTGTGGAAATCAATGAACCTTCCTCAGACTTACAGCCAGCTGGAGGAAATCCAAAGTCAGTTGTGAGGATTATTAAGCATATATTGAATTTACATCCAAATGGTATTGCCGTTTCAGATCTTCGTGCAGAGCTGACAGAATGTAATGTGTCATTGGGTAGAAACATATGTGGATATAAAAGGCTTTACCGCTTTCTATCATCAATACCAAATGTACATCTCCAGAAGGTAGGAAATGGTAATTTTTGTGTGAAGTTGCTCCCCTCAGAGTCCCCCGAACCCTCTGAAAGCAGCACTACTCTATCAACGGCATCTGCTGTTAAGAATGAGGAGAGGGGCTACACAACAACTCCAAAGCTACACAGTGAAGATAAAGACATGGATAAAGACATATATAAGAATCCTTCATTATATTCATTGCAGGAAAGGATCATTGAAGATGATTCAAAATCATTACAATCTATCCCTTCACAAGGAAGACCTATCGAGGAAGATGTGCCGCATGAATCATCTTTAGGCAGTGAGAAGGTTGTGGATGTGTCTAATGCACAACTGTCGGAGACTCAACTTTCACCAAAGGACAATGATGTTTCCAAAACTGAGATTGGTTCCTTTAAAGTAAGATCTAAAAAGTCGTTTGATGATGACATTGTTAGGTCTGAAGATGCAAGTCCAAAAGTTCTTGAAGAATACACCACTTCAGGGAATCTCGCTGCTGGTATTGATCACACAATGGTGGAAAACAATGATATAGCAAGTTATGATTCTGGAAAATCTATAGGAAAGAACAAACATGTGAATCAACCTAGAAAGGAGGTTGATGATCAAAGCCCATATACTTCAGCCGCTGATGACTCTCTAGTTGAGAAAAGACCTGATGGTTGTGTTGAAACTTACAGCAAAAGATCAACTTTCTTTAGCTGGATTAGAAGTTGGTGGCCATTTGGGAAAAGCAATGCAAAGACTGATGATATGACTGCTCATCAGAATAAGGTGACTAGTAGTTTTGAGGATTCAAAGTCATCTGAACTGAATCAGACTGCTAGTAATCTTGAAGAGCCCAAACCATTAGAACCACAGCAGGAAGATGTCCGTCATTCTGGAAAGGCTGAGGACTCCAAGTTATCTGAACTAGACCAGACTGCTGATAATCTTGAAGAGCCCAAGCTATTTGAACCACACAAGGATGTCAATCAATCAGGAAAGCCTGCGTTATTTTCTAGTGGTTCCTTTTGGAATGACATGGAATCTTTTGTTTTCAGCCCCAAAGGATCACTTCTTATTTCCCAGTCTAGAAGCAGGGAGGATTTGGCTCACAAATTACAAAAATATCACCCTGTGGTTCTCAAATCTCTTACTAAAAATGATATCTTTCAATTGGTGGAATTGTTAATAGCAGAAAAAAAATGGTTGGAGGAAAGCCCCTCACAAGCATTTCCTTTTAAACTAACTCGATCAGTTCAGAAGACTGCGTCAGGCCTGTCTAATGATTCAAATAGTTTGAGATCTTTCTTTATAACTAATAGAACATCGCAGTCCAACTTACCAAAGTCATTTGAAAATGACAAGGAGAAACACACTCAAAGTATTCAGCAAACGGGAGTTCCCAGACTTGCCACTGAAAAGAAACATACCGAGAGGTCTAGAAGTGTTATATTTCGAGATTGTGAGAAACTGGTAACTGATATATTGAGGGAACATCCAGAGGGATATAATATAAGCAGTATTCGAAAACAATTTAATAATAGATATGGCTATGACCTTGATTTCAAGAAACTTGGTTATAAGAAGATGGCATACTTGATACAGATAATGCCTGGGGTTAAAGTAGAATCCAGTCATATTTATCCTTCTGCTCCTGCTGTTTGTGGTTCTGACTCAGAAACTTCTATCCTCAAAACTGTAGCAACCAATGGCGGTGATGAAAAATTCAACTCAGATAATGAATTATCTGATACAGCCCCAAAAGAGTATAACATGGAATCTCTTTGGGAGGAATTAGGCCCTGTTTCTGCTAAAAACCTTGATCAGAATGATTTGAAATCAAATTTAAGTCAGAAAGCAATCAAACTGGACACACCAAAGAATCCTGATTATGAACCTGTTGTCTCAGATTATGATTCTTCTGATACTGAAGGGGATAGCTCTTGTTTAACTAAACCAGAAGATCAAGGAAAGCCAAAATATGATGAGCAAGACAGTTCTTTTTGGCAAACTCTGGATTCCTGGCATAGCACCAAGGAAGAAGAGAATAGAGTCCATAAATCCGAAAACATTGTTGACTTGCAAGCTCTGGATTCCCAGCATAGCACCAAGGAAGAAGAGAATAAAGTCCATAAATCCGAAAACATTGTTGACTTGAGCAATTCTCTGTTTGACATATTAAATTCATCCACAGAATCCAAACAGGGTGTTGTCGTTTCCAAAAATACTTCAGGGAATTATAGAGAAAAGCAAAGATCTCAAAAGTATTCATTTGTTGCTGACCCAGCCTTACCCAACAAGGACAAGTTTTTGGGTGGGCTACTAAATGGCTTGAAGAAAGAGGATGAGTCAAAGATGCAAAACTGA 3309 0.3962 MTTFLLRKNLLFFTSSHSTFQPRTLLLRLQLCEFSSSPTPYSHWKRHDEESRNVRVSVWWDFENCNIPAGVNVSKVAPAITDAVRANGIKGPVHITAYGDVLQLSRPNQEALAFTGIHLSHVPNGGKNSADRSLLVDLMYWVSQNPPPAHLFLISGDRDFAGILHRLRMNNYNILLAIPEKAPDVLCSAATIMWQWTSLLKGENLTGKHFNHPPDGQFGSWYGNSKVPLENPFSAAEQSPSSQKVQIVEINEPSSDLQPAGGNPKSVVRIIKHILNLHPNGIAVSDLRAELTECNVSLGRNICGYKRLYRFLSSIPNVHLQKVGNGNFCVKLLPSESPEPSESSTTLSTASAVKNEERGYTTTPKLHSEDKDMDKDIYKNPSLYSLQERIIEDDSKSLQSIPSQGRPIEEDVPHESSLGSEKVVDVSNAQLSETQLSPKDNDVSKTEIGSFKVRSKKSFDDDIVRSEDASPKVLEEYTTSGNLAAGIDHTMVENNDIASYDSGKSIGKNKHVNQPRKEVDDQSPYTSAADDSLVEKRPDGCVETYSKRSTFFSWIRSWWPFGKSNAKTDDMTAHQNKVTSSFEDSKSSELNQTASNLEEPKPLEPQQEDVRHSGKAEDSKLSELDQTADNLEEPKLFEPHKDVNQSGKPALFSSGSFWNDMESFVFSPKGSLLISQSRSREDLAHKLQKYHPVVLKSLTKNDIFQLVELLIAEKKWLEESPSQAFPFKLTRSVQKTASGLSNDSNSLRSFFITNRTSQSNLPKSFENDKEKHTQSIQQTGVPRLATEKKHTERSRSVIFRDCEKLVTDILREHPEGYNISSIRKQFNNRYGYDLDFKKLGYKKMAYLIQIMPGVKVESSHIYPSAPAVCGSDSETSILKTVATNGGDEKFNSDNELSDTAPKEYNMESLWEELGPVSAKNLDQNDLKSNLSQKAIKLDTPKNPDYEPVVSDYDSSDTEGDSSCLTKPEDQGKPKYDEQDSSFWQTLDSWHSTKEEENRVHKSENIVDLQALDSQHSTKEEENKVHKSENIVDLSNSLFDILNSSTESKQGVVVSKNTSGNYREKQRSQKYSFVADPALPNKDKFLGGLLNGLKKEDESKMQN* 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 397 420 - -
Tpr3g3107 1102 Pfam OST-HTH/LOTUS domain 268 328 IPR025605 -
Tpr3g3107 1102 Pfam OST-HTH/LOTUS domain 802 859 IPR025605 -
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 337 358 - -
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 572 623 - -
Tpr3g3107 1102 ProSiteProfiles OST-type HTH domain profile. 798 872 IPR025605 -
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 962 976 - -
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 932 979 - -
Tpr3g3107 1102 PANTHER EMB|CAB71880.1 11 1016 - -
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 572 600 - -
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 500 540 - -
Tpr3g3107 1102 CDD PIN_limkain_b1_N_like 55 179 - -
Tpr3g3107 1102 Gene3D - 794 861 IPR041966 -
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 360 374 - -
Tpr3g3107 1102 Pfam NYN domain 55 190 IPR021139 GO:0004540
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 602 623 - -
Tpr3g3107 1102 PANTHER LIMKAIN B LKAP 11 1016 IPR024768 GO:0005777|GO:0010468|GO:1903231
Tpr3g3107 1102 Gene3D - 262 338 IPR041966 -
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 336 374 - -
Tpr3g3107 1102 Gene3D - 47 197 - -
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 432 451 - -
Tpr3g3107 1102 MobiDBLite consensus disorder prediction 761 789 - -
Tpr3g3107 1102 CDD LOTUS 800 856 - -
Tpr3g3107 1102 ProSiteProfiles OST-type HTH domain profile. 263 334 IPR025605 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3107 54 202 C2H2 Transcription Factor Family AT5G61190 45.638 3.06e-38 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3107 - - mtr:MTR_3g095410 1416.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3107 3 34188293 34193629 Tpr3g3107 3 34188293 34193629 ECH