Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3106 ATGGATTTGGACGATTTCCGATCGATTTTAGATACGGCTGGCGTTGACGTATGGATGTTTATCGACACGGCGATTTCCGTCGCTTCTCATGATAACGCCGGCGAGTTGAAGCGTCGAAGAGACGGAATCGTTGAGCGACTTTACGCTGCAACGACTGCTGCTCCGGTTTGTCTGAATTGCGACGGCGGAAACCGTCTCGTGAGTGATGGAAATCATGTTAAGAAAGAGAATAGTCCTAGCTTAAGCCCTGAACGTCAACAGCGTCGCGGCGGTGGTTCTCCGGCAACGCCGCAGTCTCAGGGAAACGAGGATGGTGAAGATGAGGAGATAGATCCTTATGGTGGTTTGTTTGAAGATGAACAGAAGAAGATTCTAGAGATTAAGGAGCTTCTAGAAGATCCTCGCCAGTCTGATGAATCTTTGATGGAGTTGCTGCAAAATCTGGTGGATATTGATATTACATTCCAAGAGTTGAAGGAAACTGACATCGGGAGGAACGTGAATCAGTTGCGAAAACATCCATCGAGCGATGTTCGCCGATTGGTGAAGCTACTTGTCAAGAAGTGGAAAGAGATTGTGGATGAATGGGTGAAGCATAATCCACAGGGAGGGAAAAACACTCTGATGGCTGATGGAGATTCACCTCTGCAGAAAACCACCCCAAATGGGCATAATCATCAGATTCCTGATTTTGCGTACTCTCCAAATCCACACAATGGAAGTTCTGGTTCTGACCGTAACAATTCTGAAGTCGAACCAAAACCAAAACCTAAAACTGTTCCGCGCAAAGACCCACCTCCTAAATTAAGGCCATCACCTCCGGTTACCGCCCCTACTAATGCTACTCAAAATAGACAGAGAGAACAGAAAGAGAGCAATTTTGACGCGGAGAGGCTTGCTACGGCAAGAAAACGGCTTCAAGCGAACTATAAAGAAGCTGAAAATGCCAAAAAGCAAAGAACAATTCAGGTGATGGACATACATGAGTTACCTAAGTCAAAAGCCAAGAATGGTTACTTTCCAAAGAACAGAGGTGGTGGCAGTTCTCAGGGAAGACAGCACTGGTGA 1068 0.4635 MDLDDFRSILDTAGVDVWMFIDTAISVASHDNAGELKRRRDGIVERLYAATTAAPVCLNCDGGNRLVSDGNHVKKENSPSLSPERQQRRGGGSPATPQSQGNEDGEDEEIDPYGGLFEDEQKKILEIKELLEDPRQSDESLMELLQNLVDIDITFQELKETDIGRNVNQLRKHPSSDVRRLVKLLVKKWKEIVDEWVKHNPQGGKNTLMADGDSPLQKTTPNGHNHQIPDFAYSPNPHNGSSGSDRNNSEVEPKPKPKTVPRKDPPPKLRPSPPVTAPTNATQNRQREQKESNFDAERLATARKRLQANYKEAENAKKQRTIQVMDIHELPKSKAKNGYFPKNRGGGSSQGRQHW* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3106 355 MobiDBLite consensus disorder prediction 249 265 - -
Tpr3g3106 355 MobiDBLite consensus disorder prediction 83 101 - -
Tpr3g3106 355 SMART TFS2_5 124 195 IPR003617 GO:0005634
Tpr3g3106 355 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 117 206 IPR035441 -
Tpr3g3106 355 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 355 - -
Tpr3g3106 355 MobiDBLite consensus disorder prediction 238 355 - -
Tpr3g3106 355 Pfam TFIIS helical bundle-like domain 144 193 IPR017923 -
Tpr3g3106 355 MobiDBLite consensus disorder prediction 288 335 - -
Tpr3g3106 355 CDD TFIIS_I 121 194 - -
Tpr3g3106 355 Coils Coil 296 323 - -
Tpr3g3106 355 MobiDBLite consensus disorder prediction 70 108 - -
Tpr3g3106 355 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 122 206 IPR035441 -
Tpr3g3106 355 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 355 IPR044790 -
Tpr3g3106 355 ProSiteProfiles TFIIS N-terminal domain profile. 119 196 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3106 Tpr-Chr3 34180798 34183780 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Tpr3g3106 Med26 5.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3106 - - gmx:100790582 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3106 3 34180798 34183780 Tpr3g3106 3 34180798 34183780 ECH