Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3100 ATGGATAATGTAATAGAACTCTGTGGGAAAGTATCTCCAATCATTTCACTTAGTCCTACAAGGTTAGATTGGTGCATTAGGGTTAGGGTGATTAGGATGTGGAGTGTTAGATCCTCTGTTGTGGGTGGAAATGGTAAAAAGATTCAGGCTGTTGTTCCTAATCAGTGTGTCAATCGCTTAGTTGGTGTGTTGCATGAAGATGGTGTATATCTTATTGCTTTTTTCTATGTCCAAGATAATCACACCCCATGCATGATTACTCTCAATCCTTACAAAATAGTTTTTTGCAGTCTTACCAAAGTGTTCTCTTCCGAGAGTTTAGTTATTCCTCACTATTCACTGACTTTGCTATCTTCTGATAAAATTAAGAACTATAAAAATGGTTTGAATTACTTATTTGACGTTATTGGACTTGTGACTAATGTTCATTATGAGTATGCTGACCACTACCTTGGAGAAGGAATGTGTGCTGTGAGAGTTGAGCTTTCTGATAAGAGAGGAGTATACCAGTGTTATCTGTGTGGGAGTTTTGTTCATCAGTTTAGGGCCATGGTGTCTGAATGTTGCAATGAATTACCTGTACTGGTGTTGCAGTTTGTTAAGATTGATGTTAAGGAAGGCTATGTTTGTGTTGAAAGTGTTACTGATGTCACTAGAATGCTTTTGAATCCTAATATGTATGAAGTGTCTCAATTTAAGAAGGATTTTGCATATCTGAACAGTGTTTGTGATTTTGGCCGCAATGGTCAGTCCACAAATGGGACAATATCCAGAGAGTTGCAATTTAACAAGGTGTATCCTCACAAGACGGTGAATGAATTTGTTCATACACTAGAGGATGGTTTATTTGTTATTTGTGCGAAAATAGTTGGACTCTTTCAAGTCGATCAGTGGTGGTATCCTGTCTGTCACTGCGGTGCTTTTTTGAGTATTTCGGATGGTTCATACTATTGTGACAAATGCCATCTTTGTGTTTTCAGTTCTACTTCCAAATGCAAGCTTCAGATTGCTATCCAAGATCAGACCTCTGCTGCATTGCTTCCCATGTTTGATTATCTGGTTAAAGAAATTGGCTGCATTAATAACAATGGTCTTGATTTTGCTCTGAGTGTGAATGGTGCTGCCATTTTGAATAAGAGGATAGTTTTATTAATTGTCAAAAAGACCCAAAGGGTTGATGAAATGTCTAATCATGTTGTTGAAGTTGTTCACATTACTGATGAAATGGGATTAATTAAGCAGTTTCATAGTGATGGCAGATATTTCACTCCAACAAAGTGTGTCTACAAACCTCCCTTTGGTGCTTCCAGTTCCCGGGTGTGTGATGCTGGGAAACTTTCTGCTGCTACTGCTACTGCATATTCTATTGTTGCAGAAAAGGAGTTGGCCAACAAAGATGGTTCTAAGGATGAGGTTAATTGCTTGGTTGGTGCATCGAAAGAAAAAAACCAAGGGGTCACGTTTGAAAGTCAGGGTGGAACTTTTTTCACTTCTATTAGTGGTGAAGGATCTTCTACTTGTGGGAATTAA 1530 0.383 MDNVIELCGKVSPIISLSPTRLDWCIRVRVIRMWSVRSSVVGGNGKKIQAVVPNQCVNRLVGVLHEDGVYLIAFFYVQDNHTPCMITLNPYKIVFCSLTKVFSSESLVIPHYSLTLLSSDKIKNYKNGLNYLFDVIGLVTNVHYEYADHYLGEGMCAVRVELSDKRGVYQCYLCGSFVHQFRAMVSECCNELPVLVLQFVKIDVKEGYVCVESVTDVTRMLLNPNMYEVSQFKKDFAYLNSVCDFGRNGQSTNGTISRELQFNKVYPHKTVNEFVHTLEDGLFVICAKIVGLFQVDQWWYPVCHCGAFLSISDGSYYCDKCHLCVFSSTSKCKLQIAIQDQTSAALLPMFDYLVKEIGCINNNGLDFALSVNGAAILNKRIVLLIVKKTQRVDEMSNHVVEVVHITDEMGLIKQFHSDGRYFTPTKCVYKPPFGASSSRVCDAGKLSAATATAYSIVAEKELANKDGSKDEVNCLVGASKEKNQGVTFESQGGTFFTSISGEGSSTCGN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3100 509 Gene3D - 108 246 IPR012340 -
Tpr3g3100 509 Gene3D - 251 407 IPR012340 -
Tpr3g3100 509 SUPERFAMILY Nucleic acid-binding proteins 12 106 IPR012340 -
Tpr3g3100 509 SUPERFAMILY Nucleic acid-binding proteins 276 388 IPR012340 -
Tpr3g3100 509 Gene3D - 10 105 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3100 Tpr-Chr3 34103609 34105934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3100 6 357 Core DNA Replication Machinery Family AT5G45400 22.762 1.54e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3100 - - mtr:MTR_1g050500 194.512