Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3085 ATGTCAACAACAAATATTGTTAACCACCATAGCTTGTTTGATCAAGAGCAAGATCATGAGATCCATATGCAAACCGGGTTCAATATTCCTTTCCCTTCCAACATGACCTTACCTCCTTTGGGTAATTGCCATGATCAATCTTTGAAAGGTATTAGTGCAATAACTCCTTCTTCATCACTTTCTCCTGAAGCTGCAAATTTTGCTCAAACACTACTTGCAACAGCTGTTCAAAAACCGCGACAATTCGAAGATCTCAATGATCTTACTTCTTGTTTTGGAGGAGCAGGCCAACTCCTTTCCTTGAATAGATCAAGAGGAAATTCATGGGCATGGGGAGATCAAGTAAGTGATTGTTTGATGAGTAAAAGAAGTAGTGGAGGAGATGATCATCATCATCATCATAATCATCATATAGGGGTTTCTTCTACCATAAAAATGAAGAAAATGAAGGGAAGAAGGAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACTATGAGTGATGTGGATGTGCTGGATGATGGTTACAAATGGAGGAAGTACGGACAGAAAGTGGTCAAGAACACTCAGCATCCAAGAAGCTACTACCGTTGCACACAAGATAATTGTCGAGTAAAGAAACGCGTCGAACGATTGGCTGAAGATCCAAGAATGGTGATAACCACATATGAAGGAAGACATGCTCACTCTCCATCAAATGAACTTGAAGACTCACAAACTCACTCTGAACTCACTAATTTCTTTTGGTAG 747 0.4029 MSTTNIVNHHSLFDQEQDHEIHMQTGFNIPFPSNMTLPPLGNCHDQSLKGISAITPSSSLSPEAANFAQTLLATAVQKPRQFEDLNDLTSCFGGAGQLLSLNRSRGNSWAWGDQVSDCLMSKRSSGGDDHHHHHNHHIGVSSTIKMKKMKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNELEDSQTHSELTNFFW* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3085 248 MobiDBLite consensus disorder prediction 122 149 - -
Tpr3g3085 248 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 41 240 IPR044810 GO:0003700
Tpr3g3085 248 Pfam WRKY DNA -binding domain 172 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3085 248 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 41 240 - -
Tpr3g3085 248 ProSiteProfiles WRKY domain profile. 166 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3085 248 MobiDBLite consensus disorder prediction 225 248 - -
Tpr3g3085 248 SUPERFAMILY WRKY DNA-binding domain 163 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3085 248 Gene3D WRKY domain 158 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3085 248 SMART WRKY_cls 171 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3085 Tpr-Chr3 33689609 33692683 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3085 99 248 WRKY Transcription Factor Family AT4G39410 58.602 2.57e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g3085 WRKY 6.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3085 - - gmx:100127389 322.783