Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3081 ATGGATATTAGCTATTTTGGAAACCCTAATGCTTCAAACCCTTATCATCACTATAATAAGAATAATAATATAGCTCCTTCTTCTTCATCTGATTTCATTAACTTTTCTGATTATCTTGTGCTTGATGATGTTGTTTTTGTTGATAACAATAATAATATTAATAATCAAGAGTATTACTCATCATGGTCACAAAGTTCAGAAACTGAACAATCATCAGATAAGGCAGCTTCTAGTTCCACCACCACCACCACCGCCGATGTTGTCATTAATCAAGGATTAATCAGTGATGAAACCTCTATCAACAACAATAACACGACCACGACGATAAAGCGCAAAACTGGAGGGATTAAAGAAAATACAGTAGAAGTGAGCCCAAGAATCACGTTTAGAACGCGATCGCAGCTTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGTCAGTCAAGAATAGTCCAAACCCAAGGAACTACTACAAGTGTTCAGGTGAAAGATGTGGAGTGAAGAAAAGAGTGGAAAGGGATAGGGAAGACTCAAGCTACGTGCTAACAACTTATGAAGGTGTTCACAATCATGAGTCCCCGTGCACTTCATACTACACTAGTCCAGTGTCTTCTAATTTGGTCTATTCCGATCAATGGACTTCTGCAAACTCATCATCTTCTAATTAA 681 0.3759 MDISYFGNPNASNPYHHYNKNNNIAPSSSSDFINFSDYLVLDDVVFVDNNNNINNQEYYSSWSQSSETEQSSDKAASSSTTTTTADVVINQGLISDETSINNNNTTTTIKRKTGGIKENTVEVSPRITFRTRSQLEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSGERCGVKKRVERDREDSSYVLTTYEGVHNHESPCTSYYTSPVSSNLVYSDQWTSANSSSSN* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3081 226 ProSiteProfiles WRKY domain profile. 133 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3081 226 SUPERFAMILY WRKY DNA-binding domain 130 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3081 226 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 203 IPR044810 GO:0003700
Tpr3g3081 226 MobiDBLite consensus disorder prediction 61 82 - -
Tpr3g3081 226 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 16 203 - -
Tpr3g3081 226 Pfam WRKY DNA -binding domain 139 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3081 226 Gene3D WRKY domain 125 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3081 226 SMART WRKY_cls 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3081 Tpr-Chr3 33652254 33654614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3081 90 209 WRKY Transcription Factor Family AT5G64810 53.237 5.44e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g3081 WRKY 2.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3081 - - gmx:100127396 173.326