Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3076 ATGGCACCAAAACAAAGAACAGCTAGAGTTAGCCGTAACCCTGAATTGATCAGGGGTATCGGAAAATACTCTAGGTCTACCATGTACCACAAGAGAGGTCTTTGGGCTATCAAGGCCAAACACGGCGGCGCTTTTCCTCGCCATGATCCCGTCGCTAAACCTGAAACTCCCGCTGAGAAGCCTCCCAAATTCTACCCCGCTGATGATGTCAAGAAGCCCCTCCGTAACAAGCACAAACCAAAACCTACTAAGCTCAGGGCTAGCATTACTCCCGGCACAGTGTTGATTATTCTTGCCGGAAGATTCAAGGGGAAGAGAGTTGTGTTTCTCAAGCAACTTCCTTCTGGACTTCTTCTCGTAACCGGTCCATTCAAGATTAACGGAGTCCCTTTGAGGCGTGTGAATCAGGCTTATGTTATCGGAACATCAACCAAAGTAGACGTTTCTTCAGTTAATGTCGATAAGTTTGATGACAAGTACTTTTCAAAGGAATCCCAAAAGAAGACAAAGAAGGGAGAGGGCGAGTTCTTTGAGGCAGATAAGGAGGATAAAAAGGTTCTCCCCCAGGAAAAGAAGGATGATCAGAAGACTGTCGATGCTGGTTTGTTAAAAGCCATCGAGAGTGTTCCGGACTTGAAGACTTACCTAGGTGCTAGGTTTTCCTTGAAGGCTGGTGTGAAGCCTCACGAGTTACTCTTCTAG 702 0.4658 MAPKQRTARVSRNPELIRGIGKYSRSTMYHKRGLWAIKAKHGGAFPRHDPVAKPETPAEKPPKFYPADDVKKPLRNKHKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDVSSVNVDKFDDKYFSKESQKKTKKGEGEFFEADKEDKKVLPQEKKDDQKTVDAGLLKAIESVPDLKTYLGARFSLKAGVKPHELLF* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3076 233 Gene3D - 87 171 IPR014722 -
Tpr3g3076 233 CDD KOW_RPL6 81 233 IPR041997 -
Tpr3g3076 233 PANTHER 60S RIBOSOMAL PROTEIN L6 1 233 - -
Tpr3g3076 233 PANTHER 60S RIBOSOMAL PROTEIN L6 1 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Tpr3g3076 233 MobiDBLite consensus disorder prediction 46 75 - -
Tpr3g3076 233 Pfam Ribosomal protein L6, N-terminal domain 3 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Tpr3g3076 233 MobiDBLite consensus disorder prediction 46 85 - -
Tpr3g3076 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Tpr3g3076 233 SUPERFAMILY Translation proteins SH3-like domain 87 176 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3076 Tpr-Chr3 33598429 33600284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3076 1 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 79.828 3.86e-122 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3076 K02934 - gmx:100785356 404.06