Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3057 ATGAAACCCCCATACATCACCAACACTCTCTTACTCCTTCTTTCACTATTCCTCCTCCACTTATCACCATGCACCTCTTCTCAAAAAGACCCAACTTCTCAACTTCTCAACTTCAAACAATCTCTCCCAAACCCATCACTTCTCCATGATTGGCTACCAAACAATAACCCATGTTCATTCACAGGTATCACCTGCAACCAAACCACCATAACTTCCATACACCTTACTTTCATCCCTCTCAACATCAACCTCACCCTTATCGCCACCCATCTTCTCACCATCGACCACCTTCAAACCCTCACTCTCAAATCCACAAACCTCACTGCCTCATCTCCCATTTCACTCTCTCATTCAAAGTGCACTCCTTCACTCACTACCATAGATCTCTCACTAAACACTCTCTCTTCATCTTTCTCCGACTGGTCTTTTCTTTCTTCATGTTCATCTCTTACATCTCTTAACCTCTCCAAAAACGGTATCACTTTTGATTCTCCTAAATTCAGTTTCAGTTCATCTCTCCGGTTACTTGACCTTTCCGGTAACAAGATTTTCGGACCCGGTTTCTTCCCATGGTTAATCAATCATGAGTTAGAGTTTTTATCTCTTGCAGGAAACAAAATCACCGGCGAAGTCGACTTCTCCGGTTACACTTCTCTTAAGTATTTGAACCTTTCTGCAAATAATTTCAGTGTTTCTATTCCTTTGTTCGGTGAATGTTCTTCTCTTCAATCTCTAGACCTTTCTACAAACAAGTTCTTCGGCGACATTACCAGAACTCTTTCTCCTTGTAAGCATCTTCTTCATCTCAACGTTTCCGATAACCAGTTCACTGGTCCGGTTCCTTTTATTCCCTCCGGTTCGATAAAGTTTCTCTACCTTGCGAAAAACCACTTCGCCGGAAAAATTCCGGCGCATCTTGCTGACCACTGCTCTACTCTCGTGGAACTGGATCTTTCTTCTAACAACCTCACTGGTCCAATTCCACGCGAGTTTGGCGCGTGTAGTTTGTTGACGTCGTTCGACATATCGAACAACATGTTCTCCGGGGAGCTTCCGATGGAAGTTATAACGGAGATGAGTAGTTTGAAAGAACTTGCGGTGGCGTCTAATGAATTTTCCGGTGAATTTCCAGTGTCGTTGTCGAAGTTAACGGATTTAGAATCGTTAGATCTGAGTTCTAATAACTTCACCGGAACAGTTCCTAATTGGATTTGTGAAGGGGAAATTGGGAATAATTTGAAGGGAATTTACCTGCAAAATAACCGTTTCACGGGTTTTATTCCACCAACGTTGAGTAACTGTTCTAACCTTGTTGCACTTGATTTAAGCTTCAATTATTTCACGGGAACAATTCCTCCAAGTTTAGGTTCCCTTACGAAGCTTCGTGATTTGATTTTGTGGTTGAATCAGCTTCATGGTGAAATTCCTCAAGAGCTTCAAAATATGGAGAGTTTGGAGAATTTGATACTTGATTTCAATGACTTGACTGGAAGCATTCCTGATGGGCTAATGAATTGCACAAAGTTGAATTGGATCTCGCTTTCGAACAACAGGCTTAGCGGGGTGATTCCGAGGTCGATTGGGAAGCTTTCTAATCTTGCTATTTTGAAGCTGAGCAATAACACCTTGTCTGGCGAGATCCCGCCGGAGCTTGGAGATTGTCCTAGCTTGTTATGGTTGGATCTGAATACAAATTTACTTACAGGAATAATACCTCCTGAAATGTTCAAGCAAGCCGGAAAAATTGCGATTAACTACATTAGCAGCAAGCCATATGTATACATTAAGAATGATGGTAGTAGAGGGTGTAATGGAGCTGGAAGCTTGCTGGAATTTGCAGGGATAAGTCAGCTGAAATTGAATAGAATTTCGACGAGGAACCCTTGCAATTTCACTAGGGTTTACAAAGGTAGCATTCAGCCAGTGTTTACCCTTAATGGTTCAATGATCTTTTTTGATATTTCACACAACAATTTGTCTGGTCCTATTCCTAAGGAAATTGGTGAAATGCAATTTCTCTTCATTTTGCATATGAGTCATAATCACTTATCTGGTAGCATTCCTCAAGAGCTTGGTAAGATGAAGAATCTCAACATTCTTGATCTTTCATACAATGAGCTAGAGGGTCAAATTCCAGAAACCATGACACGGCTTTCATTGCTCACTGAATTGTACTTGTCCAACAATTTTCTCTCCGGATCGATTCCAATGGCTGGTCAATTCGATACGTTTCAGATTGGTAGTTTTCAGAACAACTCTGCTCTCTGCGGTGGTCCTCTTCCTGCATGTGGGACGATTGCAGCGGGTGCGAATTCACAGCATAAGTCTCATAGGAGACAGGCGTCACTTGCAGGGAGTGTGGCAATGGGATTGCTTTTCGCTCTTTTCTGTATTTTCGGTTTGATCTTAATTGCTGTTGAGACAAGAAAGAGGAGGAAGAAAAAGGAGGCTGCTATTGATGGCTACATTGACAATTCTCATTCGGGTAATGGCAATAATTCTGGCTGGAAACTGACCAGTGCCCGCGAAGCTCTCAGCATCAACCTCTCAACGTTTGAAAAGCCCCTTCGAAAGCTTACTTTTGCGGATCTTCTAGAGGCAACCAATGGCTTTCACAATGATAGTCTCATTGGTTCAGGTGGTTTCGGTGACGTGTATAAAGCTCAGTTGAAGGATGGAAGTGTTGTGGCCATCAAGAAGCTGATACATGTAAGTGGACAAGGGGACAGAGAATTCACAGCTGAAATGGAAACCATTGGAAAAATCAAGCACAGAAACCTTGTTCCTCTTCTGGGATACTGCAAAGTTGGAGAAGAAAGACTGTTGGTTTATGAGTACATGAAATATGGAAGTCTAGAAGATGTCCTCCACGACCCGAAGAAAGCTGGAATCAAGATGAATTGGTCAGTGAGGAGGAAGATTGCAATTGGGGCTGCAAGGGGATTGGCTTTTCTTCATCATAGTTGTATCCCCCATATCATTCACAGGGACATGAAATCAAGCAATGTGTTGCTTGATGAAAATTTGGAAGCAAGGGTCTCTGATTTTGGAATGGCTAGACTTATGAGTGCCATGGACACCCATCTGAGCGTAAGCACGTTGGCTGGAACGCCGGGTTACGTCCCTCCAGAATACTATCAGAGCTTTAGATGCTCCACTAAAGGTGATGTTTATAGTTATGGTGTAGTTTTGCTGGAGTTGCTGACGGGGAGAAGACCAACGGATTCAGCTGATTTTGGCGATAACAATCTTGTTGGATGGGTTAAACAACATGCCAAACTTAAAATAAGTGATGTTTTTGATCAAGAGCTTATGAAAGAAGACCCCAATATGGAGATTGAGCTTTTGCAGCATTTAAAGGTAGCTTGTGCTTGTTTGGATGATAGACCTTGGAGGAGACCTACAATGATTCAAGTCTTGGCAATGTTCAAGGAAATACAAGCCGGTTCTGGTGGTATGGATTCTCAGTCTACTATAGCCGCAGAAGATGAAGGTTTCAATGCCATTGAAATGGTTGAGATGAGCATTAAAGAAGTCCCTGAATTAAGCAAACACTAG 3558 0.4236 MKPPYITNTLLLLLSLFLLHLSPCTSSQKDPTSQLLNFKQSLPNPSLLHDWLPNNNPCSFTGITCNQTTITSIHLTFIPLNINLTLIATHLLTIDHLQTLTLKSTNLTASSPISLSHSKCTPSLTTIDLSLNTLSSSFSDWSFLSSCSSLTSLNLSKNGITFDSPKFSFSSSLRLLDLSGNKIFGPGFFPWLINHELEFLSLAGNKITGEVDFSGYTSLKYLNLSANNFSVSIPLFGECSSLQSLDLSTNKFFGDITRTLSPCKHLLHLNVSDNQFTGPVPFIPSGSIKFLYLAKNHFAGKIPAHLADHCSTLVELDLSSNNLTGPIPREFGACSLLTSFDISNNMFSGELPMEVITEMSSLKELAVASNEFSGEFPVSLSKLTDLESLDLSSNNFTGTVPNWICEGEIGNNLKGIYLQNNRFTGFIPPTLSNCSNLVALDLSFNYFTGTIPPSLGSLTKLRDLILWLNQLHGEIPQELQNMESLENLILDFNDLTGSIPDGLMNCTKLNWISLSNNRLSGVIPRSIGKLSNLAILKLSNNTLSGEIPPELGDCPSLLWLDLNTNLLTGIIPPEMFKQAGKIAINYISSKPYVYIKNDGSRGCNGAGSLLEFAGISQLKLNRISTRNPCNFTRVYKGSIQPVFTLNGSMIFFDISHNNLSGPIPKEIGEMQFLFILHMSHNHLSGSIPQELGKMKNLNILDLSYNELEGQIPETMTRLSLLTELYLSNNFLSGSIPMAGQFDTFQIGSFQNNSALCGGPLPACGTIAAGANSQHKSHRRQASLAGSVAMGLLFALFCIFGLILIAVETRKRRKKKEAAIDGYIDNSHSGNGNNSGWKLTSAREALSINLSTFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDPKKAGIKMNWSVRRKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGRRPTDSADFGDNNLVGWVKQHAKLKISDVFDQELMKEDPNMEIELLQHLKVACACLDDRPWRRPTMIQVLAMFKEIQAGSGGMDSQSTIAAEDEGFNAIEMVEMSIKEVPELSKH* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3057 1185 CDD STKc_IRAK 877 1146 - -
Tpr3g3057 1185 ProSiteProfiles Protein kinase domain profile. 871 1146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3057 1185 Gene3D Phosphorylase Kinase; domain 1 832 946 - -
Tpr3g3057 1185 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 1156 - -
Tpr3g3057 1185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 993 1005 IPR008271 GO:0004672|GO:0006468
Tpr3g3057 1185 Pfam Leucine rich repeat N-terminal domain 34 66 IPR013210 -
Tpr3g3057 1185 Gene3D Transferase(Phosphotransferase) domain 1 947 1148 - -
Tpr3g3057 1185 SUPERFAMILY L domain-like 287 752 - -
Tpr3g3057 1185 Gene3D Ribonuclease Inhibitor 35 763 IPR032675 -
Tpr3g3057 1185 SMART serkin_6 871 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3057 1185 Pfam Leucine Rich repeat 263 278 IPR001611 GO:0005515
Tpr3g3057 1185 Pfam Leucine Rich repeat 309 325 IPR001611 GO:0005515
Tpr3g3057 1185 Pfam Leucine Rich repeat 146 161 IPR001611 GO:0005515
Tpr3g3057 1185 Coils Coil 468 488 - -
Tpr3g3057 1185 PRINTS Leucine-rich repeat signature 313 326 - -
Tpr3g3057 1185 PRINTS Leucine-rich repeat signature 694 707 - -
Tpr3g3057 1185 SUPERFAMILY RNI-like 141 352 - -
Tpr3g3057 1185 Pfam Leucine rich repeat 508 567 IPR001611 GO:0005515
Tpr3g3057 1185 Pfam Brassinosteroid receptor island domain 580 644 IPR045381 -
Tpr3g3057 1185 SUPERFAMILY Protein kinase-like (PK-like) 857 1147 IPR011009 -
Tpr3g3057 1185 Gene3D - 585 645 - -
Tpr3g3057 1185 PANTHER SYSTEMIN RECEPTOR SR160 10 1156 - -
Tpr3g3057 1185 Pfam Leucine Rich Repeat 386 405 IPR001611 GO:0005515
Tpr3g3057 1185 Pfam Protein kinase domain 871 1141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3057 1185 ProSitePatterns Protein kinases ATP-binding region signature. 877 900 IPR017441 GO:0005524
Tpr3g3057 1185 SMART LRR_typ_2 530 554 IPR003591 -
Tpr3g3057 1185 SMART LRR_typ_2 458 481 IPR003591 -
Tpr3g3057 1185 SMART LRR_typ_2 482 506 IPR003591 -
Tpr3g3057 1185 SMART LRR_typ_2 383 407 IPR003591 -
Tpr3g3057 1185 SMART LRR_typ_2 670 694 IPR003591 -
Tpr3g3057 1185 SMART LRR_typ_2 718 741 IPR003591 -
Tpr3g3057 1185 SMART LRR_typ_2 555 578 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3057 Tpr-Chr3 33098699 33102856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3057 34 1181 Receptor kinase-like Gene Family AT4G39400 65.520 0.0 1438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Tpr3g3057 Pkinase 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3057 K13415 - gmx:100499629 1733.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3057 3 33098699 33102856 Tpr3g3057 3 33098699 33102856 ECH