Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3056 ATGTCAACAACAAATATTGTTAACCACCATAGCTTGTTTGATCAAGAGCAAGATCATGAGATCCATATGCAAACCGGGTTCAATATTCCTTTCCCTTCCAACATGACCTTACCTCCTTTGGGTAATTGCCATGATCAATCTTTGAAAGGTATTAGTGCAATAACTCCTTCTTCATCACTTTCTCCTGAAGCTGCAAATTTTGCTCAAACACTACTTGCAACAGCTGTTCAAAAACCGCGACAATTCGAAGATCTCAATGATCTTACTTCTTGTTTTGGAGGAGCAGGCCAACTCCTTTCCTTGAATAGATCAAGAGGAAATTCATGGGCATGGGGAGATCAAGTAAGTGATTGTTTGATGAGTAAAAGAAGTAGTGGAGGAGATGATCATCATCATCATCATCATAATAATCATCATATAGGGGTTTCTTCTACCATAAAAATGAAGAAAATGAAGGGAAGAAGGAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACTATGAGTGATGTGGATGTGCTGGATGATGGTTACAAATGGAGGAAGTACGGACAGAAAGTGGTCAAGAACACTCAGCATCCAAGAAGCTACTACCGTTGCACACAAGATAATTGTCGAGTAAAGAAACGTGTCGAACGATTGGCTGAAGATCCAAGAATGGTGATAACCACATATGAAGGAAGACATGCTCACTCTCCATCAAATGAACTTGAAGACTCACAAACTCACTCTGAACTCACTAATTTCTTTTGGTAG 753 0.3997 MSTTNIVNHHSLFDQEQDHEIHMQTGFNIPFPSNMTLPPLGNCHDQSLKGISAITPSSSLSPEAANFAQTLLATAVQKPRQFEDLNDLTSCFGGAGQLLSLNRSRGNSWAWGDQVSDCLMSKRSSGGDDHHHHHHNNHHIGVSSTIKMKKMKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNELEDSQTHSELTNFFW* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3056 250 Gene3D WRKY domain 160 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3056 250 MobiDBLite consensus disorder prediction 122 148 - -
Tpr3g3056 250 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 41 242 IPR044810 GO:0003700
Tpr3g3056 250 SMART WRKY_cls 173 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3056 250 ProSiteProfiles WRKY domain profile. 168 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3056 250 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 41 242 - -
Tpr3g3056 250 SUPERFAMILY WRKY DNA-binding domain 165 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3056 250 MobiDBLite consensus disorder prediction 227 250 - -
Tpr3g3056 250 Pfam WRKY DNA -binding domain 174 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3056 Tpr-Chr3 33066912 33069928 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3056 99 250 WRKY Transcription Factor Family AT4G39410 58.602 2.86e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g3056 WRKY 7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3056 - - gmx:100127389 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3056 3 33066912 33069928 Tpr3g3056 3 33066912 33069928 ECH