Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3052 ATGGATATTAGCTATCTTGGAAACCCTAATGCTTCAAACCCTTATCATCACTATAATAAGAATAATAATATAGCTCCTTCTTCTTCATCTGATTTCATTAACTTTTCTGATTATCTTGTGCTTGATGATGTTGTTTTTGTTGATAACAATAATAATATTAATAATCAAGAGTATTACTCATCATGGTCACAAAGTTCAGAAACTGAACAATCATCAGATAAGGCAGCTTCTAGTTCCACCACCACCACCGCCGCCGATGTTGTCATTAATCAAGGATTAATCAGTGATGAAACCTCTATCAACAACAATAACACAACCACGACCACGACGATAAAGCGCAAAACTGGAGGGATTAAAGAAAATACAGTAGAAGTGAGCCCAAGAATCACGTTTAGAACGCGATCGCAGCTTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGTCAGTCAAGAATAGTCCAAACCCAAGGAACTACTACAAGTGTTCAGGTGAAAGATGTGGAGTGAAGAAAAGAGTGGAAAGGGATAGGGAAGACTCAAGCTACGTGCTAACAACTTATGAAGGTGTTCACAATCATGAGTCCCCGTGTACTTCATACTACACTAGTCCAGTGTCTTCTAATTTGGTCTATTCCGATCAATGGACTTCTGCAAACTCATCATCTTCTAATTAA 687 0.3785 MDISYLGNPNASNPYHHYNKNNNIAPSSSSDFINFSDYLVLDDVVFVDNNNNINNQEYYSSWSQSSETEQSSDKAASSSTTTTAADVVINQGLISDETSINNNNTTTTTTIKRKTGGIKENTVEVSPRITFRTRSQLEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSGERCGVKKRVERDREDSSYVLTTYEGVHNHESPCTSYYTSPVSSNLVYSDQWTSANSSSSN* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3052 228 SMART WRKY_cls 140 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3052 228 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 205 IPR044810 GO:0003700
Tpr3g3052 228 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 16 205 - -
Tpr3g3052 228 MobiDBLite consensus disorder prediction 61 82 - -
Tpr3g3052 228 SUPERFAMILY WRKY DNA-binding domain 132 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3052 228 ProSiteProfiles WRKY domain profile. 135 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3052 228 Pfam WRKY DNA -binding domain 141 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3052 228 Gene3D WRKY domain 127 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3052 Tpr-Chr3 33037998 33040627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3052 90 211 WRKY Transcription Factor Family AT5G64810 54.676 1.31e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g3052 WRKY 2.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3052 - - gmx:100127396 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3052 3 33037998 33040627 Tpr3g3052 3 33037998 33040627 ECH
Tpr1g3385 1 38217357 38223459 Tpr3g3052 3 33037998 33040627 PCT