Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3050 ATGGAATTAGCCGGTAAACTCCACCACCTCGACCTCACCGGAGCATTCATTCTAGACTCACGACGTCTACCACGCACCCTAACTCACACTCATCTCACCCCTAAACCCAACACTAACACTAATTTAGTTTATCCCAATCGATTCTTTACCTCAAAAAAACCTAATTACACTTCACGTTTATCCGCTGTAACAGCAGTCGACGATACTCCAATAGCAGAAGACGATATCGAGTCTCTATTTTCCAATACTTCAACCGATGAACGACGCGGCAAGAATAAACAATCAAGTACAGGAGCTTCAAGCGTTTCTTCTGGTGTGAAGTTGGAAAATATAAGTAAAACTTATAAAGGTGTTACGGTTTTGAAAGAGGTTAATTGGGAAGTGAAAAAAGGAGAGAAAGTTGGTTTGGTTGGTGTAAATGGTGCGGGGAAAACGACTCAAATGAGGATTATTGCTGGTCTTGAAGAACCGGATTCGGGGAATGTGATAAAGGCGAAACCGAATATGAAAATTGCGTTTTTGAGTCAAGAATTTGAGGTGTCACAGAGTAGGACTGTGAGGGAGGAGTTTATGAGTGCTTTTAAAGAGGAAATGGAGGTTGCTGGAAGGTTGGAGAAAGTGCAGAAGGCTCTTGAGGGTTCTGTTAATGATTTGGAGTTGATGGGGAGGCTTTTGGATGAGTTTGATTTGCTTCAGAGACGAGCACAAGCTGTGAATTTGGATGTTGTTGATTCGAAGATTAGTAAATTGATGCCTGAGCTTGGTTTTGGTACCGAGGATTCGGATAGGTTGGTTGCTTCTTTTAGTGGTGGATGGCAGATGAGGATGTGTCTTGGCAAGATTCTACTTCAGGAACCAGATTTGTTGTTGTTAGATGAACCGACTAATCACCTTGATCTTGACACCATTGAGTGGCTTGAAGAATATCTTAACAAGCAGGATGTGCCGATGGTTATCATTTCCCATGACAGAGCTTTTCTCGATCAACTATGTACAAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATTTGAGGGAAATTATTCTCAGTATATACTTTCAAAGGCAACTTGGATTGAAACACAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAACATACAAGAGAATTGATAAGTAGGTTAGGTGCCGGAGCAAGTTCGGGCCGCGCCTCTTCCGCTGAGAAGAAATTGGAAAAACTTCTGGGAGAGGAACTAGTAGAGAAGCCATTTGAACGGAAACAAATGAAAATCAGGTTCCCTGTGCGTGGAAGCAGTGGAAGATCTGTTGTAACAGTTAGGAACTTGGATTTTGGATTTGAGGATAAAACACTTTTCAACAAGGCAAATCTTACACTTGAAAGGGGAGAAAAGGTTGCCATTCTCGGTCCAAATGGATGTGGCAAGAGTACTTTACTAAAATTGATTATGGGTTTAGAGAAGCCAACTGGCGGTGAAGTTATCCTTGGGGAGCACAATGTATTGCCTAACTATTTTGAGCAGAATCAGGCTGAGGCGCTTGATCTGGAAAAGACAGTGCTTCAGACAGTAGAGGAAGCTGCAGAGGACTGGAGGAGTGACGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGATCGTAAAGTTTCTCTATTGAGTGGTGGTGAGAAGGCACGATTGGCTTTCTGCAAATTCATGGTAAAACCATCAACTCTGCTTGTTTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATATCAGAGTATGAGGGCACTGTTATCACAGTATCTCATGATCGGTACTTTATAAAGCAGATAGTTAATAGAGTGATTGAAGTAAAAGATTGCGATTTACAGGATTATGCTGGGGATTATAATTATTATTTGGAGAAGAATCTTGATGCTAGGGAAAAGGAGCTTGAACGCCAGGCAGAGCTTGAGGACAAAGCTCCTAAATTGAAAGCCAAATCTAAGATGTCCAAGGCTGAGAAAGAAGCAAGGAAGAAGCAAAAGATGCAGGCCTTTCAGGCAGGAAAACAGAAGTCTAAAAGTGCAAAAAACTCAAAGAGATGGAATTGA 2103 0.4156 MELAGKLHHLDLTGAFILDSRRLPRTLTHTHLTPKPNTNTNLVYPNRFFTSKKPNYTSRLSAVTAVDDTPIAEDDIESLFSNTSTDERRGKNKQSSTGASSVSSGVKLENISKTYKGVTVLKEVNWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDSGNVIKAKPNMKIAFLSQEFEVSQSRTVREEFMSAFKEEMEVAGRLEKVQKALEGSVNDLELMGRLLDEFDLLQRRAQAVNLDVVDSKISKLMPELGFGTEDSDRLVASFSGGWQMRMCLGKILLQEPDLLLLDEPTNHLDLDTIEWLEEYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYILSKATWIETQYAAWEKQQKEIEHTRELISRLGAGASSGRASSAEKKLEKLLGEELVEKPFERKQMKIRFPVRGSSGRSVVTVRNLDFGFEDKTLFNKANLTLERGEKVAILGPNGCGKSTLLKLIMGLEKPTGGEVILGEHNVLPNYFEQNQAEALDLEKTVLQTVEEAAEDWRSDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVITVSHDRYFIKQIVNRVIEVKDCDLQDYAGDYNYYLEKNLDAREKELERQAELEDKAPKLKAKSKMSKAEKEARKKQKMQAFQAGKQKSKSAKNSKRWN* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3050 700 MobiDBLite consensus disorder prediction 650 680 - -
Tpr3g3050 700 Pfam ABC transporter 449 580 IPR003439 GO:0005524
Tpr3g3050 700 Pfam ABC transporter 121 296 IPR003439 GO:0005524
Tpr3g3050 700 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 43 690 - -
Tpr3g3050 700 CDD ABCF_EF-3 433 623 - -
Tpr3g3050 700 MobiDBLite consensus disorder prediction 650 700 - -
Tpr3g3050 700 Pfam ABC transporter 335 422 IPR032781 -
Tpr3g3050 700 ProSitePatterns ABC transporters family signature. 268 282 IPR017871 GO:0005524
Tpr3g3050 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 106 364 IPR003439 GO:0005524
Tpr3g3050 700 PANTHER ABC TRANSPORTER F FAMILY MEMBER 5 43 690 - -
Tpr3g3050 700 Gene3D - 103 387 IPR027417 -
Tpr3g3050 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 341 IPR027417 -
Tpr3g3050 700 MobiDBLite consensus disorder prediction 78 103 - -
Tpr3g3050 700 SMART AAA_5 457 625 IPR003593 -
Tpr3g3050 700 SMART AAA_5 130 345 IPR003593 -
Tpr3g3050 700 Gene3D - 396 661 IPR027417 -
Tpr3g3050 700 Coils Coil 644 680 - -
Tpr3g3050 700 ProSitePatterns ABC transporters family signature. 552 566 IPR017871 GO:0005524
Tpr3g3050 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 636 IPR027417 -
Tpr3g3050 700 CDD ABCF_EF-3 106 336 - -
Tpr3g3050 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 433 648 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3050 Tpr-Chr3 33018212 33023578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3050 430 650 Calmodulin-binding Proteins AT2G36910 25.101 4.98e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3050 - - gmx:100796907 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3050 3 33018212 33023578 Tpr3g3050 3 33018212 33023578 ECH