Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3037 ATGTCCAGAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATAAAGAGGGAAGGAGATCATCATCATCATCATCATCATCATGTTTCAAATAACTCTCATCAGATGGGAAGAAGACATATGTTAGGACCACCTGGAACCCTAAATACTATAACACCTTGTGCAGCATGTAAGCTTTTAAGAAGAAGATGTGCTCAAGAATGTCCTTTCTCTCCCTATTTCTCTCCTCATGAACCTCAAAAGTTTGCTTCTGTTCACAAAGTTTTTGGTGCTAGCAATGTCTCCAAGATGCTAATGGAGGTAGCAGAATGTTCAAGAGCAGATGCAGCAAATAGTCTTGTTTATGAAGCAAATGTTAGACTAAGAGATCCAGTTTATGGATGCATGGGTGCAATTTCAACATTACAACAACAGGTTCAATCTTTACAAGCTGAACTCAATGTATTAAGAAGTGAAATACTTAAATACAAATTAAGAGAAGCAGCTCACATCAACATGAATAATATGAATATGAATAATATGCTACAAGCTTCTTCTCATCATCATGTTCCTATGCTTCCTTCTAATTCCTCTGTGGCTGTTTCAATTGCTGCTCCACCGCCGCCGCCACCACCGCCTCCTCCTCCTCTTCCTCCAACTTCTAATTCATCTTCTTCCATATACTTCCAAGAGAGGGATCACAACAACTATAGCACAATTTCAAGTGATGATAATATTTCCTATTTTGGTTAA 732 0.3852 MSRERERFDEIGKKIKREGDHHHHHHHHVSNNSHQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVAECSRADAANSLVYEANVRLRDPVYGCMGAISTLQQQVQSLQAELNVLRSEILKYKLREAAHINMNNMNMNNMLQASSHHHVPMLPSNSSVAVSIAAPPPPPPPPPPPLPPTSNSSSSIYFQERDHNNYSTISSDDNISYFG* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3037 243 MobiDBLite consensus disorder prediction 196 214 - -
Tpr3g3037 243 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 35 242 - -
Tpr3g3037 243 MobiDBLite consensus disorder prediction 16 37 - -
Tpr3g3037 243 MobiDBLite consensus disorder prediction 18 34 - -
Tpr3g3037 243 Pfam Mitochondrial fission regulator 137 229 IPR007972 -
Tpr3g3037 243 Pfam Lateral organ boundaries (LOB) domain 53 150 IPR004883 -
Tpr3g3037 243 MobiDBLite consensus disorder prediction 192 243 - -
Tpr3g3037 243 MobiDBLite consensus disorder prediction 215 243 - -
Tpr3g3037 243 Coils Coil 132 159 - -
Tpr3g3037 243 PANTHER LOB DOMAIN PROTEIN 35 242 - -
Tpr3g3037 243 ProSiteProfiles LOB domain profile. 52 153 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3037 Tpr-Chr3 32845733 32847703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3037 1 170 AS2 family AT2G30340 63.842 2.55e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr3g3037 LOB 1.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3037 - - gmx:100790799 312.383