Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3026 ATGACATTCAAGCGTAGGAATGGAGGTCGCAACAAGCATGGCCGTGGCCATGTCAAATTCATCCGTTGCTCTAACTGCGGCAAATGCTGCCCTAAGGATAAGGCTATTAAGCGTTTTCTTGTGAGGAACATTGTTGAACAGGCTGCCGTTAGAGATGTTCAGGAAGCTTGTGTTTATGATCAATACACTCTTCCTAAGCTGTATGTGAAGATGCAGTACTGTGTTTCCTGTGCTATCCACTCTCATGTTGTGAGAGTCAGATCTCGCACTGATAGGAGGAAGCGTGAGCCTCCACAGCGTTTTGTTAGGCGCAGGGATGATGCGCCAAGGCCCGGACAGCCCGGCCAAGCTCCCCGCCCTGCTGGACCTGGAGCTGCCCCAGCCCGTGCCTAG 393 0.5242 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFVRRRDDAPRPGQPGQAPRPAGPGAAPARA* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3026 130 MobiDBLite consensus disorder prediction 86 130 - -
Tpr3g3026 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 - -
Tpr3g3026 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 IPR000892 GO:0003735|GO:0005840|GO:0006412
Tpr3g3026 130 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Tpr3g3026 130 MobiDBLite consensus disorder prediction 90 110 - -
Tpr3g3026 130 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Tpr3g3026 130 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3026 Tpr-Chr3 32697212 32698924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3026 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 2.15e-69 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3026 K02976 - gmx:100499862 209.92