Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3010 ATGGCTTCTTCTACGTCGTCTCTAGGCATTGCTTGCGGCGGAAACAACCGTTTCGCCGCCGGAGTTGGTATTAAGAAGAGTGTGTCAGTCTCTTTTGTGTCGATCGGGGATTGGAATCGATCGACGGTGAGGAAAGGGAGGATTGCGGCGGTGATGACGGGGAGAGGAGAGGAGAATCGGATGATTGTGGAACAGGGGAAAAACAGGGGAGGAGGAACGAGAGACGCTGTTGAGGCTCAAGAGAAGCTTGATCGGTGGATGAAGGAATCGGTGGTGGATATTGAACGAATTCCATTGAATGAAGTGTTTGAACACCTGAAATGTTCAAGGGAGGGTCTCACTTCCGATGAAGGAGCCAACAGGCTCCAATCATTTGGACCCAACAAGCTTGAAGAGATTAAGGATAGCAAATTTTTGAAATTTTTGGGTTTTATGTGGAACCCTTTGTCATGGGTTATGGAAGTTGCTGCCATCATGGCGATTGCTCTGGCGAATGGTGGAGGAAAGCCTCCGGACTGGCAAGATTTTGTTGGAGTCGTTGTTCTCTTGGTGGCCAACTCGACAATCAGTTTCGTAGAAGAGAACAATGCTGGCAATGCTGCGGCCGCTCTTATGGCTGGATTAGCTCCAAAGACAAAGGTGCTAAGAGACGGCAAATGGAGTGAGGAAGATGCTGCAATTTTAGTACCAGGAGACATAATTAGTATCAAGTTAGGAGACATTATTCCTGCCGATGCACGACTTCTAGAGGGCGATCCATTAAGCGTTGATCAATCTGCTTTAACAGGAGAGTCACTTCCTGTGACAAAGTGTGCAACTCAAGAAGTGTTTTCAGGATCAACCGTTAAGAAGGGTGAGATTGAAGCAGTTGTGTATGCTACTGGTGTGCACACATTTTTCGGCAAAGCAGCTCATTTGGTGGATAGTACAAACCAAGTTGGACATTTTCAGAAAGTGCTAACAGCTATTGGTAACTTCTGCATTTGTTCAATTGCTATTGGAATAGTCATTGAGCTTGTTGTGATGTATCCGATTCAACACCGCAAGTATAGAGATGGAATTGACAATCTCTTGGTTTTATTGATTGGTGGAATTCCAATTGCAATGCCAACTGTTTTGTCTGTTACTATGGCTATCGGTTCTCATAGGCTTTCGCAGCAAGGCGCAATCACAAAAAGAATGACTGCTATTGAAGAAATGGCCGGAATGGATGTTCTTTGCAGTGATAAAACTGGAACTCTCACTCTGAATAAGCTTAGTGTTGACAAAAACTTGGTTGAGGTTTTTGCTAGAGGTATTGATAAGGACCATGTGATACTTCTAGCTGCAAGAGCTTCTAGGATAGAAAATCAGGATGCTATTGATGCTGCAATTGTTGGAATGCTTTCTGATCCAAAAGAGGCTAGAGCTGATATCAAGGAGGTGCACTTTCTTCCGTTCAATCCAGTCGAAAAGAGGACTGCTCTTACCTATGTTGATTCTGATGGAAATTGGCATAGAGCTAGCAAAGGAGCCCCTGAACAGATATTGAATCTCTGCAACTGCAGAGAGAATGTAAGGAGAAAGGCTAATGAAGTGATTGATAGGTTTGCTGAGCGTGGACTTAGATCCTTAGGCGTTGCTTATCAAGAAGTACCCGAAAAATCTAAAGACAGTCTTGGGGCTCCATGGCAATTAATTGGATTATTGCCCTTATTCGATCCCCCAAGGCACGACAGTGCTGAAACCATTAGAAGAGCACTCAGCCTTGGAGTAAATGTAAAAATGATCACTGGGGACCAACTTGCCATCGGAAAGGAAACAGGCAGAAGGCTTGGAATGGGAACGAACATGTATCCATCATCTGCGTTGCTTGGAGAAGGTTCTTCTATTTCAGAAGTTCCTATTGATGAGTTGATCGAGAAAGCTGATGGATTTGCAGGAGTATTTCCCGAGCACAAATACGAAATAGTAAGAAGGCTTCAAGAGAGGAAACACATATGTGGCATGACAGGTGATGGAGTGAACGACGCACCAGCGTTGAAGAGAGCTGATATCGGAATTGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTGCTGATATTGTTCTCACTGAACCTGGTTTGAGTGTAATTATCAGTGCTGTGCTCACCAGCAGGGCCATTTTCCAAAGAATGAAAAACTATACTATTTATGCTGTGTCCATCACAATCCGAATTGTGTTTGGTTTCATGTTCATTGCTTTGATCTGGAAATTTGATTTTGCACCCTTCATGGTTCTGATAATTGCAATACTGAATGATGGTACCATAATGACAATATCTAAGGATAGAGTGAAACCATCTCCACTACCAGACAGTTGGAAACTGAAGGAGATATTCGTTACTGGTATTGTGCTTGGCAGTTACATGGCACTGATGACAGTCATATTTTTCTGGGCGGCTAATGATACCGACTTTTTCTCGGACAAGTTTGGTGTGAGATCTCTGAGAAATAATCCTACTGAAATGATGGCAGCTTTGTACTTACAAGTCAGTATCATAAGCCAAGCATTAATTTTTGTGACTAGGTCTCGCAATTGGTCTTTCTTCGAAAGACCTGGCCTTTTACTACTCGGTGCTTTTTTCATTGCTCAAATAATTGCAACACTTATAGCAGTGTATGCTCATTGGGAATTTGCCAGAATTAAGGGGATTGGATGGGGTTGGGCTGGTGTTATCTGGCTGTACAGTTTGGTAACTTATATCCCTCTTGATTTGCTCAAAGTTGCAATCCGCTATATTCTAAGCGGAAAGGCGTGGGATAATCTTTTGGAAAACAAGACCGCGTTTACTACGAAGAAAGATTATGGCAGAGAAGAGAGGGAAGCGAAATGGGCGTCAGTGCAGAGATCACTTCATGGTCTTCAGGCTTCTACCTCGAACAACATTGTCAATGAAAACAGGAGTTACCGCGAACTTTCAGAAATAGCCGAACAAGCCATGAGACGTGCAGAAGTTGCACGGCTGTTGGAGAAGAACACCCTGAAAGGGCGTGTTGAGTCGGTCGTCAGGCTTAAAGGTTTGGACATTGACACCTCCAAGAATAATTATACAATTTAA 3084 0.4361 MASSTSSLGIACGGNNRFAAGVGIKKSVSVSFVSIGDWNRSTVRKGRIAAVMTGRGEENRMIVEQGKNRGGGTRDAVEAQEKLDRWMKESVVDIERIPLNEVFEHLKCSREGLTSDEGANRLQSFGPNKLEEIKDSKFLKFLGFMWNPLSWVMEVAAIMAIALANGGGKPPDWQDFVGVVVLLVANSTISFVEENNAGNAAAALMAGLAPKTKVLRDGKWSEEDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKCATQEVFSGSTVKKGEIEAVVYATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGIVIELVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFARGIDKDHVILLAARASRIENQDAIDAAIVGMLSDPKEARADIKEVHFLPFNPVEKRTALTYVDSDGNWHRASKGAPEQILNLCNCRENVRRKANEVIDRFAERGLRSLGVAYQEVPEKSKDSLGAPWQLIGLLPLFDPPRHDSAETIRRALSLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEGSSISEVPIDELIEKADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFVTGIVLGSYMALMTVIFFWAANDTDFFSDKFGVRSLRNNPTEMMAALYLQVSIISQALIFVTRSRNWSFFERPGLLLLGAFFIAQIIATLIAVYAHWEFARIKGIGWGWAGVIWLYSLVTYIPLDLLKVAIRYILSGKAWDNLLENKTAFTTKKDYGREEREAKWASVQRSLHGLQASTSNNIVNENRSYRELSEIAEQAMRRAEVARLLEKNTLKGRVESVVRLKGLDIDTSKNNYTI* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3010 1027 SFLD p-type atpase 389 715 IPR044492 -
Tpr3g3010 1027 Gene3D - 210 294 - -
Tpr3g3010 1027 PANTHER CALCIUM-TRANSPORTING ATPASE 87 1007 - -
Tpr3g3010 1027 SUPERFAMILY Calcium ATPase, transduction domain A 210 307 IPR008250 -
Tpr3g3010 1027 PRINTS P-type cation-transporting ATPase superfamily signature 257 271 - -
Tpr3g3010 1027 PRINTS P-type cation-transporting ATPase superfamily signature 407 421 - -
Tpr3g3010 1027 PRINTS P-type cation-transporting ATPase superfamily signature 561 572 - -
Tpr3g3010 1027 PRINTS P-type cation-transporting ATPase superfamily signature 583 593 - -
Tpr3g3010 1027 PRINTS P-type cation-transporting ATPase superfamily signature 664 683 - -
Tpr3g3010 1027 PRINTS P-type cation-transporting ATPase superfamily signature 687 699 - -
Tpr3g3010 1027 CDD P-type_ATPase_H 112 917 IPR006534 GO:0008553|GO:0016021|GO:0120029
Tpr3g3010 1027 ProSitePatterns E1-E2 ATPases phosphorylation site. 409 415 IPR018303 -
Tpr3g3010 1027 Pfam haloacid dehalogenase-like hydrolase 403 678 - -
Tpr3g3010 1027 SUPERFAMILY Calcium ATPase, transmembrane domain M 93 923 IPR023298 -
Tpr3g3010 1027 Gene3D - 404 701 IPR023214 -
Tpr3g3010 1027 Pfam E1-E2 ATPase 209 386 - -
Tpr3g3010 1027 Pfam Cation transporter/ATPase, N-terminus 97 159 IPR004014 -
Tpr3g3010 1027 SFLD C1.7: P-type atpase like 389 715 - -
Tpr3g3010 1027 Gene3D - 172 891 - -
Tpr3g3010 1027 PANTHER PLASMA MEMBRANE ATPASE 87 1007 - -
Tpr3g3010 1027 PRINTS H+-transporting ATPase (proton pump) signature 523 541 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g3010 1027 PRINTS H+-transporting ATPase (proton pump) signature 636 652 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g3010 1027 PRINTS H+-transporting ATPase (proton pump) signature 664 680 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g3010 1027 PRINTS H+-transporting ATPase (proton pump) signature 695 720 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g3010 1027 PRINTS H+-transporting ATPase (proton pump) signature 836 857 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g3010 1027 SUPERFAMILY HAD-like 403 711 IPR036412 -
Tpr3g3010 1027 Gene3D - 419 566 IPR023299 GO:0000166
Tpr3g3010 1027 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 112 882 IPR006534 GO:0008553|GO:0016021|GO:0120029
Tpr3g3010 1027 SMART Cation_ATPase_N_a_2 93 165 IPR004014 -
Tpr3g3010 1027 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 180 426 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g3010 1027 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 639 754 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g3010 1027 Gene3D - 976 1027 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3010 Tpr-Chr3 32518434 32533600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3010 87 1027 Primary Pumps ATPases AT2G07560 80.255 0.0 1558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3010 K01535 - gmx:100791692 1612.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3010 3 32518434 32533600 Tpr3g3010 3 32518434 32533600 ECH