Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3004 ATGGCTTCTGGTTCTTCTTCTTCTTCAAATTGGGTGATGGAAAGTGGTGACATTCCTCATGTTCTAGCTGTTGATGATTCTCTTGTTGATCGAAAACTTGTTGAGAAACTTCTTAGGAATTCTTGTTGCAAAGTTACAACTGCTGAAAATGGGCCTAAGGCATTGGAGTTATTGGGCTTGTCAAGTGGTGAACAGAACACCTTGAATGGGAGATCCAAAGTAAATTTGGTTATCACAGACTATTGCATGCCAGGAATGACTGGCTATGAGTTACTTAAGAAAATTAAGCAATCATCTGTAATGAAGGAGGTTCCAGTAGTGATCATGTCATCTGAGAACATACCAACAAGGGTCAACAAGTGTCTAGAAGAAGGAGCTCAGATGTTCATACTAAAGCCACTCAAACAATCTGATGTAAAACAATTGACATGTCAGTTAATGAATTTGGGAAGGTGA 456 0.3904 MASGSSSSSNWVMESGDIPHVLAVDDSLVDRKLVEKLLRNSCCKVTTAENGPKALELLGLSSGEQNTLNGRSKVNLVITDYCMPGMTGYELLKKIKQSSVMKEVPVVIMSSENIPTRVNKCLEEGAQMFILKPLKQSDVKQLTCQLMNLGR* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3004 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 149 IPR045279 GO:0009736
Tpr3g3004 151 SUPERFAMILY CheY-like 19 148 IPR011006 -
Tpr3g3004 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 8 149 - -
Tpr3g3004 151 Pfam Response regulator receiver domain 21 141 IPR001789 GO:0000160
Tpr3g3004 151 Gene3D - 20 151 - -
Tpr3g3004 151 ProSiteProfiles Response regulatory domain profile. 20 147 IPR001789 GO:0000160
Tpr3g3004 151 SMART REC_2 19 143 IPR001789 GO:0000160
Tpr3g3004 151 CDD REC_typeA_ARR 21 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3004 Tpr-Chr3 32429186 32430969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3004 1 148 Response Regulator Gene Family AT3G56380 64.238 5.72e-61 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr3g3004 Response_reg 2.6e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3004 K14492 - gmx:100778707 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3004 3 32429186 32430969 Tpr3g3004 3 32429186 32430969 ECH
Tpr4g2508 4 27134737 27135822 Tpr3g3004 3 32429186 32430969 PCT