Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3001 ATGAGTATTGTTTTACATGAAAGTGCTTCTTCTAAGATGAAGGAGATACTCATAAAAGAACTTATTCAGGGTAAAGAATATGCTACTCAGTTAAAGTTTATGTTTGAGAATCATGTTGACTCTAATGGATCTGCTTCTGTTAAGGAATTAGTTTGCAATGTGTTGAGAACTTTCTCTCAGACTATTTCTGTGATGACTTCTTCTGAAGCTTGTAATTTTGATGAAGTTGCTCAAAATCATAATTCAGGAGAAGATGGTTCATTGGTTGCAGCTTCTTGTAATGATGATGTTAAGTCTGAAGATTCAAGTGAGAGTAAGAAAAGATTGTTGCCTACTACAAAGGATCGAAGAGGTTCCTACAAAAGAAGGAAGACTGATGAGACAAGGACCATAGTCTCTAAAACCATTGGTGACAATCATTCCTGGAGAAAGTACGGACAGAAGGAAATCCTTAATTCTCAATTCCCTAGGAGTTACTTCAGATGTACTAGAAAGCATGAACAAGGTTGCAAAGCAACCAAACAAGTACAATTGATAGAAGAGAATCCAGAAATGTACCAAATTACGTACATCGGCTATCACACATGCAAAGCCTCTCTACAGACTCCACAAATGGTTGCATTTTCTGCAGGTACTAATTGGGACTCATTTACTGTGAATCCTCACTCAAAGGAAGTTCTAGTAAACTATGATCAACAGGTTCCCCCTATTAGTAGCTCGGAAAGGCCGGTTGTAAAACAAGAATATCTGAACAACGACGACAATACTACTCCTCAGAGGAGTGATCTTACAGATAACTTATTGGATGAACATAACTTGTGGTCTGATTTTAAGGATCTTGAACTCCCTAAACCTTCCACTCTAAGCTTTAATAACGTGGCGCCGTCTGATAATAATGCAGATAATGTGTATTCATGTACTGAATCTCAAAATCTTGAAATTGATTTTGGGTCGTTTTCGGATTTCAGCAATGATTTAGTATATTTTGATGAAAGTCAGTTACTTTAG 1008 0.3681 MSIVLHESASSKMKEILIKELIQGKEYATQLKFMFENHVDSNGSASVKELVCNVLRTFSQTISVMTSSEACNFDEVAQNHNSGEDGSLVAASCNDDVKSEDSSESKKRLLPTTKDRRGSYKRRKTDETRTIVSKTIGDNHSWRKYGQKEILNSQFPRSYFRCTRKHEQGCKATKQVQLIEENPEMYQITYIGYHTCKASLQTPQMVAFSAGTNWDSFTVNPHSKEVLVNYDQQVPPISSSERPVVKQEYLNNDDNTTPQRSDLTDNLLDEHNLWSDFKDLELPKPSTLSFNNVAPSDNNADNVYSCTESQNLEIDFGSFSDFSNDLVYFDESQLL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3001 335 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 6 319 - -
Tpr3g3001 335 MobiDBLite consensus disorder prediction 97 127 - -
Tpr3g3001 335 Pfam WRKY DNA -binding domain 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3001 335 Gene3D WRKY domain 123 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3001 335 SMART WRKY_cls 136 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3001 335 ProSiteProfiles WRKY domain profile. 131 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3001 335 SUPERFAMILY WRKY DNA-binding domain 133 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3001 335 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 6 319 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3001 Tpr-Chr3 32398080 32401056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3001 17 242 WRKY Transcription Factor Family AT3G56400 41.150 3.62e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g3001 WRKY 5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3001 - - gmx:100170683 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3001 3 32398080 32401056 Tpr3g3001 3 32398080 32401056 ECH