Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2982 ATGGAAGCGTTAGTGTGCAGAAAATTGGGTGACCCAACGGTGAGCGTGGAAGATGATAACAGCCCAATAATCGTATCCAAGAATCACCCAATCCCTCAATTGAATTCTCCTACAGCAGTAAGAGTTAGAATCAAAGCTACAAGCTTGAATTTCGCTAATTACTTGCAGATTCTTGGCAAGTATCAAGAGAAACCACCTTTGCCGTTCATTCCTGGATCTGATTTTTCAGGCATCGTTGATTCCGTTGGTTCCAAAGTTACCAATTTTCGTATTGGAGACCCTGTTTGTTCCTTTGCTGCTCTTGGTTCTTATGCTCAGTATATAGTTGTTGATCAGAACGAATTGTTTCGCATGCCGCAAGGTTGCGATTTGGTTGCTGCTGGAGCACTTGCTGTGGCATTTGGCACTTCACATGTTGCACTTGTTCATAGAGCTCAGTTGACATCTGGTCAGGTATTGTTGGTTTTGGGTGCAGCAGGAGGAGTGGGTCTAGCAGCTGTGCAAATTGGAAAAGCATGCGGAGCCGTTGTCATTGCTGTTGCTAGAGGGGCTGAAAAAGTGCAGCTCTTGAAATCACTTGGTGTGGATCATGTGGTGGACTTGGGTAATGAAAATGTCACCGAGAGTGTCAAAGAGTTCCTTAAGGTCAGAAGGCTTAAAGGGGTCGATGTCCTGTATGACCCTGTTGGAGGCAAGCTTAACAAAGAATCTTTGCGGCTTCTGAAATGGGGAGCTAACATTCTAATAATTGGGTTTGCAAGTGGAGAAGTTCCTGTCATCCCTGCTAACATTGCTCTTGTTAAGAATTGGACAGTACATGGCCTGTATTGGGGTAGTTATAAAATACACCGCCCAGTTGTTCTTGAAGACTCTCTGAAGGAGCTACTGTCTTGGTTGACAAAAGGCTTGATTTCCGTTCACATTTCTCATTCTTACAGCCTGTCAGAGGCCAACCTCGCCTTCTCTGCTATAAGAGATAGGAAAGCTATAGGGAAGGTGATGATTGTATTCGATGAGAAAAGCACAAGATCTAAGCTGTAA 1041 0.4428 MEALVCRKLGDPTVSVEDDNSPIIVSKNHPIPQLNSPTAVRVRIKATSLNFANYLQILGKYQEKPPLPFIPGSDFSGIVDSVGSKVTNFRIGDPVCSFAALGSYAQYIVVDQNELFRMPQGCDLVAAGALAVAFGTSHVALVHRAQLTSGQVLLVLGAAGGVGLAAVQIGKACGAVVIAVARGAEKVQLLKSLGVDHVVDLGNENVTESVKEFLKVRRLKGVDVLYDPVGGKLNKESLRLLKWGANILIIGFASGEVPVIPANIALVKNWTVHGLYWGSYKIHRPVVLEDSLKELLSWLTKGLISVHISHSYSLSEANLAFSAIRDRKAIGKVMIVFDEKSTRSKL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2982 346 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 150 171 IPR002364 GO:0008270|GO:0016491
Tpr3g2982 346 Gene3D - 34 331 - -
Tpr3g2982 346 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 2 1 336 - -
Tpr3g2982 346 Pfam Alcohol dehydrogenase GroES-like domain 38 97 IPR013154 -
Tpr3g2982 346 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 336 - -
Tpr3g2982 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 288 IPR036291 -
Tpr3g2982 346 Pfam Zinc-binding dehydrogenase 161 300 IPR013149 -
Tpr3g2982 346 Coils Coil 344 346 - -
Tpr3g2982 346 CDD QOR1 1 335 - -
Tpr3g2982 346 Gene3D - 133 280 - -
Tpr3g2982 346 SMART PKS_ER_names_mod 17 335 IPR020843 GO:0016491
Tpr3g2982 346 SUPERFAMILY GroES-like 27 148 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2982 Tpr-Chr3 32210307 32217625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2982 68 266 Monolignol Biosynthesis Gene Families AT1G72680 24.576 3.66e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2982 K00344 - gmx:100817700 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2982 3 32210307 32217625 Tpr3g2982 3 32210307 32217625 ECH