Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2973 ATGGAGACTCTGAAAGCAGCGATTCCAAATGAACTAAAACAATCAATTAGGGATAGCAGCAATGTAGAAGATACTCTTCGCGATACTTGTTCTTCTCTTCATCAATTCTTTCTTCATTTTCAACCATTTCACCAGGTGGTGACTGAACTTGCCGACCCAAGCTATGCACTGTGCGGTAAGAGTAAAGAAGCTTCTTTGGAATATAAGCAGCTTGGTAATCAATGCTTCTTCGACGCTGATTATGTCAAGGCTCTGGATTATTATACTCAGGCATTGCGCAGGGCTCCTTTTGAAGTTGGTGACATGAAAACTAATCTGGTTGCAACATTGTATATCAATCGAGCTATTGTATTGCATAAAATGAATCTTTTAGTAGAATGTTTGCGAGACTGCAATCGAGCTCTTCAGATATGTCCAAGCTATGCAAAGGCATGGTATAGGAGAGGAAAGGCAAATGTGTCATTGGGAAATAATAGAGATGCGATCTGCGACTTAAATATAGCTAAGAGTGTCGAATCATCAACAGGTGGGAAGAGACAAGTAGAAAGCGAGCTGAAAATTATCTTAGACCAATCCAAAGGCACAAATATAGTAGTACAGCCGCAATATAAGGAGAACAGCTTGAGTACAGTGGGTGAGATGCCTCAAATAAAGCTGCGGAGTGTCTCCACGCCTGATAAAGGACGAGGCATGGTGCCGTCGCATGATGTTTCACCAGGTTCGTTGGTTCATGCTGAAGAACCTTATGCTACAATAATATTAAAGCAATGTCGAGAAACTCATTGCCATTATTGCTTTAATGACCTACCTGCTGATAGAGTTCCTTGTATATCATGTTCAATACCATTGTATTGCTCCCAGCAATGCCAGATAAAGGCAGGTGGGGAAATGTTCAGGATTTCCACAGAAGATAGTAATATTCTTAAAAACTTACCCGGTGATATTGGAAAATATGCTGCTGAAGTGATTCAATACAATGATTGTGAACAAAAGATTGATGATGTTACTGAACATAAACATGAATGTCAAGGGGTACATTGGCCTGCTGTACTGCCTTCTGAGATAGTTTTGGCCGGCCGAGTTGTAGCCAAGTTTCTGTCGAAGAGCTCGTCTGGAGATATCGCAAGTTTTGTGGAAAATCTGGAACTTTCTCATTGTTATGAACATATGCCATTTGAAAGTAAATTGGATTCACATATATACGCCATTGTATTGTTATATTGTCTTAAACACTCTTATGGAACTATGTTTTCCATCGACGGAATCTCTATATCACAGGTTGTCATAGTTATATCTCAGATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAATAGACGCTCATGGACTGTCAGATCAATCTGGAGGATTTACATTTCATTCCAGTGTACATTTAACTAGTAATGTGGAACAGGTCAGAGTGGGTAAAGCTATTTATAAAGCTGGCAGTTTATTCAATCATTCTTGCCAACCAAATGTTCATGCATATTTTCTTTCACGCACACTCTATTTACGAACAACAAAAGTTGTAGCAGCTGGGTGTCAGCTGGAATTGTCTTATGGTCCACAGGTTGGGTTGTGGGATTGTAAAGATCGCCAAAATTTTCTCAAAGATGAATACGCATTTCATTGTCAATGTGCTGGTTGTTCAGAAGTTAATCTATCTGACATTGTCATCAATGCTTTTCGTTGTGTCAAACCAAATTGTTCCGGCGCAGTGTTGGAAAGCAGAGTACTTGAGTGTGAAAAGCAGAAAATCAAATACTTCCCTATTCCTAACAAAGTTATCAAGAATGATGACATCTATGAAGTATGTCTTCATACATTTAACCAAAATGACGCCTCTATTAATATTCAACCTGGATACTGTTTAAAATGTGGTTCTTACTCTGATCTGGAGTCTTCACGTACCACAGTTGATAAAGCCTTAATATGTATTAAAAGGCTGCAGGATGCAATACAGTCAAAAGACATTTCAAATACTTCCATTTCAGACGCTTTGAGATCTCTTCATTTGCTGAGATCAAATTTGCATGCATACAATAAGGTTATTGCAGAGGCAGAAGACAACATAGCCCAAGCTTTTTGTTTAGTGGGAGAATTACAATTATCCGTGGATCATTGTAAAGCATCTATTCAGATTCTGGAGAAGCTATATGATCCTGATGATATTGTTATTGCTTATGAACTTGTGAAGCTTTCGTCCGTCCAACTTTCCTTGGGTGATGATAGTGCTGTCGACAGTATTAGTCGGATAGGTGCTATCTTCTCGCGTTATTATGGACTTCATGCAGACTTGGTCTTTCCCTATCTTCAGTACCTTAGGAGAGAAATTTAG 2343 0.3884 METLKAAIPNELKQSIRDSSNVEDTLRDTCSSLHQFFLHFQPFHQVVTELADPSYALCGKSKEASLEYKQLGNQCFFDADYVKALDYYTQALRRAPFEVGDMKTNLVATLYINRAIVLHKMNLLVECLRDCNRALQICPSYAKAWYRRGKANVSLGNNRDAICDLNIAKSVESSTGGKRQVESELKIILDQSKGTNIVVQPQYKENSLSTVGEMPQIKLRSVSTPDKGRGMVPSHDVSPGSLVHAEEPYATIILKQCRETHCHYCFNDLPADRVPCISCSIPLYCSQQCQIKAGGEMFRISTEDSNILKNLPGDIGKYAAEVIQYNDCEQKIDDVTEHKHECQGVHWPAVLPSEIVLAGRVVAKFLSKSSSGDIASFVENLELSHCYEHMPFESKLDSHIYAIVLLYCLKHSYGTMFSIDGISISQVVIVISQIKVNCMTVVRLKSIDAHGLSDQSGGFTFHSSVHLTSNVEQVRVGKAIYKAGSLFNHSCQPNVHAYFLSRTLYLRTTKVVAAGCQLELSYGPQVGLWDCKDRQNFLKDEYAFHCQCAGCSEVNLSDIVINAFRCVKPNCSGAVLESRVLECEKQKIKYFPIPNKVIKNDDIYEVCLHTFNQNDASINIQPGYCLKCGSYSDLESSRTTVDKALICIKRLQDAIQSKDISNTSISDALRSLHLLRSNLHAYNKVIAEAEDNIAQAFCLVGELQLSVDHCKASIQILEKLYDPDDIVIAYELVKLSSVQLSLGDDSAVDSISRIGAIFSRYYGLHADLVFPYLQYLRREI* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2973 780 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 779 - -
Tpr3g2973 780 Gene3D Tetratricopeptide repeat domain 528 776 IPR011990 GO:0005515
Tpr3g2973 780 Gene3D SET domain 230 260 IPR046341 -
Tpr3g2973 780 ProSiteProfiles SET domain profile. 215 523 IPR001214 GO:0005515
Tpr3g2973 780 SUPERFAMILY TPR-like 62 168 IPR011990 GO:0005515
Tpr3g2973 780 Gene3D Tetratricopeptide repeat domain 40 196 IPR011990 GO:0005515
Tpr3g2973 780 Coils Coil 672 692 - -
Tpr3g2973 780 SUPERFAMILY SET domain 206 553 IPR046341 -
Tpr3g2973 780 SMART tpr_5 108 141 IPR019734 GO:0005515
Tpr3g2973 780 SMART tpr_5 687 720 IPR019734 GO:0005515
Tpr3g2973 780 SMART tpr_5 65 98 IPR019734 GO:0005515
Tpr3g2973 780 SMART tpr_5 142 175 IPR019734 GO:0005515
Tpr3g2973 780 Pfam SET domain 228 523 IPR001214 GO:0005515
Tpr3g2973 780 Gene3D SET domain 419 522 IPR046341 -
Tpr3g2973 780 ProSiteProfiles TPR repeat profile. 65 98 IPR019734 GO:0005515
Tpr3g2973 780 Gene3D - 261 293 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tpr3g2973 SET 8.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2973 K24634 - gmx:100783548 1196.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2973 3 32125265 32133697 Tpr3g2973 3 32125265 32133697 ECH