Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2970 ATGTCAAGAGAGTTTGATTTCATCAAGGATCTCACCAAAGATAGGGAGATTTGGAAAATAGCTGTAAGAGTTGTTGACACTTGGACTGTTATAGGCACCAATGGTTTTCCACATGTTGAAATGGTTATTGCTGATTCAAAGGGTGATCGTGTTCAAGCTATAACTCGCCATAAGGAATTTGAACATTGGAAGGATTTTGTTGTCTACAATAATGTCTATGTTTTGCATAACTGTCATGTTTATGATAATGATGCAGGTTTTAAAACCTGTGATAGTCCATACAAAGTTGTGTTTGGTTCCGGTACCAAGTTCATGAAAGATGACTCTATCACTAACATTCCTCCTCATCATTTTCGCTTCAAAAGTTTTAAGGAAGTTCAGGATGGAAAGTTTAAAATCAATCTTTTGTATGAGATCATTGGCGTTCTTCATGAAGTTGTCAAAACTCAGACCACAACTTCTGGAAGAAAACCTTGCACAAATTTAATCTTGGCTAATGAAAGTGGAGACATGGTTGATGTTACTTTGTGGGAAGCTTTTTCTACTCAATTACAAAACTTAATTTCTGGTCGCAAAGAAAAGGGTCCAATCTTTTTAATCCTAACACATGCTCAGTGTAAACTAGGAGGTCTATAA 636 0.3601 MSREFDFIKDLTKDREIWKIAVRVVDTWTVIGTNGFPHVEMVIADSKGDRVQAITRHKEFEHWKDFVVYNNVYVLHNCHVYDNDAGFKTCDSPYKVVFGSGTKFMKDDSITNIPPHHFRFKSFKEVQDGKFKINLLYEIIGVLHEVVKTQTTTSGRKPCTNLILANESGDMVDVTLWEAFSTQLQNLISGRKEKGPIFLILTHAQCKLGGL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2970 211 Gene3D - 111 209 IPR012340 -
Tpr3g2970 211 SUPERFAMILY Nucleic acid-binding proteins 118 200 IPR012340 -
Tpr3g2970 211 Gene3D - 3 106 IPR012340 -
Tpr3g2970 211 Pfam Domain of unknown function DUF223 40 132 IPR003871 -
Tpr3g2970 211 SUPERFAMILY Nucleic acid-binding proteins 4 114 IPR012340 -
Tpr3g2970 211 CDD RPA1_DBD_A_like 19 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2970 Tpr-Chr3 32093484 32094388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2970 18 187 Core DNA Replication Machinery Family AT5G45400 23.370 2.04e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2970 - - mtr:MTR_6g464080 263.462