Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2969 ATGGCACCCCCGGGCAGACCAAAAAAAGTTGTGCGAATGGAAGAAGAAGATGGTCATGATGGTCATGAGATGATGAAGAATGTGGTGAGAGCTGTGCCATTTTTGAAACTATTGAGCTATGCTGATTATGTGGATTGGATTCTTATGGGTTTGGGAACATTAGGTTCTATTGTGCATGGCATGGCACTTCCTGTTGGGTATTTGTTGTTAGGAAAAGCTCTTAATGCTTTTGGAAATAATATTCATGACATTGATGCTATGGTTCCTGCTCTTAAAAAGGTTATTCCATTTGTGTGGTACATGGCCATTGCCACATTTCCTGCTGGGGTACTTGAGATTGGTTGTTGGATGTATGCAAGTGAAAGACAGTTATCACGCCTAAGATTAGCATATCTAAAAGCAGTCCTAAACCAAGAAATAGGAGCTTTTGATACAGAATTAACAAGTGGTAAAGTCATCACAGGAATAAGCAAACACATGAGTGTAATACAAGATGCCATTGGTGAGAAGTTGGGTCACTTCACCTCTAGCTGTGCAACTTTCTTTGCTGGAATTGTGATCGCCGCGATATGCTGTTGGGAAGTGGCACTTCTATGTTTAGTGGTTGTCCCTCTTATTCTTATAATTGGAGCAACTTACACTAAGAAAATGAATAGAATCTCAACTACCAAATTGTTTTACCATTCTGAAGCCACATCTATGATAGAGCAGACAATATCACAAATAAAAACAGTATATGCTTTTGTTGGAGAGGGATTGGCAATCAAATCCTTCACAGAGAACATGGAAAATCAGTATTTGATAAGCAAAGGGGAGGCACTTGTGAAAGGAGTTGGAACAGGAATGTTTCAAACAGTGAGTTTTTGTTCTTGGTCTCTTATTATATGGGTTGGAGCTGTTGTCGTAAGAGCCGGGAGAGCTAAGGGAGGAGATATAATAGCTGCAGTAATGAGTATTCTTTTTGGCGCCATATCTATCACTTATGCAGCACCAGACATGCAAATATTCAACCAGGCGAAAGCTGCCGGGTATGAGGTCTTCGAAGTGATCCAAAGAAAGCCACTAATACACAGTGAATCAAAAGGGGAGATGCCTAGTAAGATTAACGGTTACATTGAGCTTCGAAATGTTTACTTTTCATACCCATCACGGCCGGAGAAACCTATCCTTCAAGGACTGTCATTGTCCATACCAGCAGGAAAGACAGTAGCTCTAGTTGGTAGCAGCGGCTGCGGAAAGAGCACTGTTATTTCCCTCATAAATAGGTTTTATGACCCCATGCGAGGAGAAATTTTTATTGACAGTCACAATATCAAGGACCTCGATCTGAAGTTCCTTCGAAGTAATATAGGGGCCGTTTACCAAGAACCATCACTCTTCACAGGCACGATCAAGGACAACTTGAAACTGGGAAAGATGGATGCGGATGATGAAGAAATACAAAAGGCAGCAGTGATGTCCAATGCACACTCTTTCATATCACAGCTTCCTAATCAATACCTAACTGAGGTAGGACAAAGGGGAGTTCAAGTATCAGGAGGTCAGAAACAGAGAATTGCAATTGCAAGAGCCATTCTGAAAAACCCTCCCATTCTTTTGCTTGACGAGGCCACTAGTGCCCTTGATTCAGAGTCGGAAAAGCTGGTTCAAGAAGCACTTGATACAGCTATGCAGGGAAGGACTGTCATTTTGATTGCACACAGGCTCTCAACAGTTGTAAATGCAGATATGATTGCTGTAGTGGAGAATGGGCAAATTGTAGAGACAGGAACACACCAGAGTTTGTTAGACACAAGCAAATTTTATAGTACATTATTCAGCATGCAGAACCTTGAATCAGCTCCTGAACTAAGAACTACAACTTACAAAAATAAAAGTGTTCGCCAAGAAGCCAGTATTGATGAAACTAGACCATTACCAGATACACAGAGAGAGGTTCAAAGAGATCTCACAGAGCCTTCTGTGATCAAAGAACAGAACAAGACGAGCATAAGAGAAGAAAATATATTTTTCAGAATTTGGTTTGATTTAAAAAAGAAGGAGCTGGTGAAGATTGCTATTGGCTCGTTTGCAGCAGCTTTCTCTGGCATCTCAAAGCCGTTTTTCGGATTCTACATCATCACAATTGGAGTAGCATACTTCGAAGAAGATGCAAAACGAAAAGTCGGAATGTACTCGGCCATCTTCTCTGGAATAGGGTTGCTTTCACTATTTAGCCACACCTTCCAGCATTACTTCTTTGGAGTGGTTGGAGAAAAGGCCATGTCGAATTTCAGACTTGCTCTATATTCAGGTGTGCTTAGTAACGAAGTAGGCTGGTTTGACAAACCTGAGAACACTGTCGGCTCATTAACATCACGCATCATCAGTGATACTGCCATGGTCAAAATCGTAATTGCTGATCGCATGTCTGTGATTGTGCAATGTGTTTCCTCCATACTTATAGCAACAGGTGTTAGCATGTATGTCAACTGGAGAATGGGTTTGGTAGCATGGGCTGTGATGCCCTGCCACTTCATAGGTGGTCTCATTCAAGCCAAGTCTGCCAAAGGATTTTCAGGTGACTATTCTGCTACACATTCAGACCTTGTTGCTCTTGCGTCTGAGTCCACGACCAACATAAGAACTATTGCATCATTTTGTCATGAAGAACAAGTACTGAAAAAAGCCAAAATATATCTGGACATTCCAAAGAAAAAATACAGGAAAGAAAGTATCAAATACGGCATCATTCAAGGCTTCTCCCTTTGCTTGTGGAACATTGCACACGTGGTTGCTTTGTGGTACACAACAATTCTGGTTGACAGACGTCAAGCCACCTTTGAAAATGGAATAAGAGCATACCAAATTTTTTCACTCACAGTTCCTTCTATCACAGAATTATACACACTGATCCCAACTGTCATCACTGCCATCAATATGCTTACCCCAGCATTCAAAACCTTTGACCGTAAAACTGAAATTGAACCAGATATACCGGATGATTCCCAACCTGAGAGGATCCAAGGAAATGTCGAATTTGAAAATGTAAATTTCAAGTACCCTTTAAGACCTGAAGTGACCGTTCTCGAAAATTTCAGTTTACAAATTGAAGCCGGATCAAAGGTCGCTTTTGTAGGACCAAGTGGCGCTGGAAAATCATCGGTATTGGCCCTTTTACTGAGATTTTATGATCCAGTGATGGGAAAAGTATTAATTGATGGGAAAGACTTGAAGGAATATAATCTAAGATGGTTAAGGACACAGATAGGGCTGGTACAACAAGAGCCACTGCTTTTTAACTGCTCAATTAGAGACAATATTTGCTATGGCAATAAAGCAGCTTCTGAAAGTGAAATTGTGGAGGTTTCAAGAGAAGCAAATATACATGAATTTGTAAGTAATCTACCAAATGGATATGACACTGTTGTTGGCGAGAAAGGCTGTCAGCTTTCAGGAGGACAAAAGCAAAGAATAGCCATTGCCAGAACCTTACTAAAGAAGCCAGCAATATTACTCCTTGATGAAGCAACGAGTGCCCTCGATGCTGAGTCCGAAAGAACTATAGTAAATGCAATTAAAGCATTGAATCTGAAGGAAGAAAGTGGTTTGTGTTCAAGAATCACCCAGATCACAGTAGCTCATAGACTTTCAACAGTCAGAAACTCGGATACCATAATCGTCATGGAAAAAGGTAGAATTGTAGAGACGGGCTCCCACTCAACCCTAATAGCAGTGGATGCAGGACTTTATTCAAGATTATTCAGACTGCAGAGCTTTGACGAAACCTCATAG 3774 0.4104 MAPPGRPKKVVRMEEEDGHDGHEMMKNVVRAVPFLKLLSYADYVDWILMGLGTLGSIVHGMALPVGYLLLGKALNAFGNNIHDIDAMVPALKKVIPFVWYMAIATFPAGVLEIGCWMYASERQLSRLRLAYLKAVLNQEIGAFDTELTSGKVITGISKHMSVIQDAIGEKLGHFTSSCATFFAGIVIAAICCWEVALLCLVVVPLILIIGATYTKKMNRISTTKLFYHSEATSMIEQTISQIKTVYAFVGEGLAIKSFTENMENQYLISKGEALVKGVGTGMFQTVSFCSWSLIIWVGAVVVRAGRAKGGDIIAAVMSILFGAISITYAAPDMQIFNQAKAAGYEVFEVIQRKPLIHSESKGEMPSKINGYIELRNVYFSYPSRPEKPILQGLSLSIPAGKTVALVGSSGCGKSTVISLINRFYDPMRGEIFIDSHNIKDLDLKFLRSNIGAVYQEPSLFTGTIKDNLKLGKMDADDEEIQKAAVMSNAHSFISQLPNQYLTEVGQRGVQVSGGQKQRIAIARAILKNPPILLLDEATSALDSESEKLVQEALDTAMQGRTVILIAHRLSTVVNADMIAVVENGQIVETGTHQSLLDTSKFYSTLFSMQNLESAPELRTTTYKNKSVRQEASIDETRPLPDTQREVQRDLTEPSVIKEQNKTSIREENIFFRIWFDLKKKELVKIAIGSFAAAFSGISKPFFGFYIITIGVAYFEEDAKRKVGMYSAIFSGIGLLSLFSHTFQHYFFGVVGEKAMSNFRLALYSGVLSNEVGWFDKPENTVGSLTSRIISDTAMVKIVIADRMSVIVQCVSSILIATGVSMYVNWRMGLVAWAVMPCHFIGGLIQAKSAKGFSGDYSATHSDLVALASESTTNIRTIASFCHEEQVLKKAKIYLDIPKKKYRKESIKYGIIQGFSLCLWNIAHVVALWYTTILVDRRQATFENGIRAYQIFSLTVPSITELYTLIPTVITAINMLTPAFKTFDRKTEIEPDIPDDSQPERIQGNVEFENVNFKYPLRPEVTVLENFSLQIEAGSKVAFVGPSGAGKSSVLALLLRFYDPVMGKVLIDGKDLKEYNLRWLRTQIGLVQQEPLLFNCSIRDNICYGNKAASESEIVEVSREANIHEFVSNLPNGYDTVVGEKGCQLSGGQKQRIAIARTLLKKPAILLLDEATSALDAESERTIVNAIKALNLKEESGLCSRITQITVAHRLSTVRNSDTIIVMEKGRIVETGSHSTLIAVDAGLYSRLFRLQSFDETS* 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2969 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 970 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g2969 1257 CDD ABC_MTABC3_MDL1_MDL2 1005 1251 - -
Tpr3g2969 1257 SUPERFAMILY ABC transporter transmembrane region 36 354 IPR036640 GO:0005524|GO:0016021
Tpr3g2969 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 609 IPR027417 -
Tpr3g2969 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1005 1249 IPR003439 GO:0005524
Tpr3g2969 1257 Pfam ABC transporter 390 539 IPR003439 GO:0005524
Tpr3g2969 1257 Pfam ABC transporter 1023 1172 IPR003439 GO:0005524
Tpr3g2969 1257 Gene3D - 995 1256 IPR027417 -
Tpr3g2969 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 372 608 IPR003439 GO:0005524
Tpr3g2969 1257 PANTHER BRACHYTIC2 22 1253 - -
Tpr3g2969 1257 CDD ABC_MTABC3_MDL1_MDL2 372 609 - -
Tpr3g2969 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 998 1251 IPR027417 -
Tpr3g2969 1257 CDD ABC_6TM_Pgp_ABCB1_D2_like 679 988 - -
Tpr3g2969 1257 SMART AAA_5 399 591 IPR003593 -
Tpr3g2969 1257 SMART AAA_5 1032 1226 IPR003593 -
Tpr3g2969 1257 Gene3D - 362 610 IPR027417 -
Tpr3g2969 1257 ProSitePatterns ABC transporters family signature. 1144 1158 IPR017871 GO:0005524
Tpr3g2969 1257 MobiDBLite consensus disorder prediction 628 651 - -
Tpr3g2969 1257 Pfam ABC transporter transmembrane region 50 323 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g2969 1257 Pfam ABC transporter transmembrane region 687 944 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g2969 1257 SUPERFAMILY ABC transporter transmembrane region 678 991 IPR036640 GO:0005524|GO:0016021
Tpr3g2969 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 51 338 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g2969 1257 CDD ABC_6TM_Pgp_ABCB1_D1_like 49 346 - -
Tpr3g2969 1257 Gene3D ABC transporter type 1, transmembrane domain 36 968 IPR036640 GO:0005524|GO:0016021
Tpr3g2969 1257 PANTHER ABC TRANSPORTER B FAMILY 22 1253 - -
Tpr3g2969 1257 ProSitePatterns ABC transporters family signature. 511 525 IPR017871 GO:0005524
Tpr3g2969 1257 MobiDBLite consensus disorder prediction 624 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2969 Tpr-Chr3 32075014 32082740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2969 2 1256 Calmodulin-binding Proteins AT2G36910 40.793 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2969 K05658 - zju:107414909 1806.96