Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2957 ATGGGTTCTCTTGACTGTGTTCCATCGCTTGATCATGGGATGGCGGTTTTGCCGTTGAATTCGCTTCCGTTAGGGTTCCGATTTCGACCTTCCGATGAGGAACTTGTTGATTACTATCTACGTTCTAAGATCAATGGGAATGGTGATGAGGTTTGGGTTATTCGAGAGATTGATATCTGCAAATGGGAACCATGGGATATGCCTGGTTTGTCGGTGATACGAAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCACAGGATCGAAAGTATCCAAACGGACATCGATTGAACAGAGCAACAACTCATGGTTATTGGAAGGCAACGGGAAAGGATCGTAGAATCAAGTCTGGAAACATCTTGATTGGAATGAAGAAGACTCTAGTTTTCTACAGTGGTCGTGCACCCAAAGGGAAGAGGACTAATTGGGTTATGCACGAGTATCGTCCCACTCTGAAGGAGCTTGATGGTACCAACCCTGGACAGAATCCGTATGTCCTCTGTCGGTTATTTAAGAAAAATGATGAGAGCCTTGAAGTTTCAAACTGTGGTGAAGTGGAGCAAGCTACTCCAGCTCCTTTGACTGCCAATTACTCTCCTGAAGAAATACAATCGGATCAAGCTCCTATTACGGCATCCACATCACAGGTCACAGAAGAGGATAAACAGCTGCCCTTTATCCCCGATGTCTCTGAGGAAACCATATCTAATGTTATAACCTCGGTCGATTGCCATAGTGACGGATATGATGCTCATGATGCCCAAAATCAAATTGTTAAACAAGCTGCAGAGGAGGATCAGGCGTCAATCTTGGACATGTATTATAACCCAAAAGACGGCCTATTATTAGATGACAGATTATTCTCCCCAGTTTTGGCGCACATGCCACAAGAATTTAATTATCAAGCAAACAATGAATCAGATGGTCAATATGGGCTTCAATATGGTACAAATGAGATAAACATTTCGGACTTTTTAAATTATAATCTTAATTGGGATCAACTTCCTTCTGAGGAGTTCAGTAGTCACCAGCAGAACTTCTCCTTGTTTAATGTTATTAAAGACAATGGTTCAGGAAGTGAATCAGAAGCGGGCTCTAATATAACTGGTATGCAAGCTGCTTATTCTCAAGAAGCAATTGCCAGAAGCTTTCCTTCTGCGACAACACCATCATTTAACACCTTTGACCATAGTGGCGATGATCAAAAGAGCAATGTTGTATTATTGCAAAACAATTTCCAGACATCTTTTCCATCGGATGTTAATTATGGTGAAGTGTGCAATGTTGTCAATGGTTATGATCAACCAAGTAACTATAATAATACAGTTATGCCTGCTGAAAGTGGAATCATTAGAAGGGCCAGACCGGCACGAGACGAACAATTGAAGACAAATCATATGCAAGGTACTGCTCAAAGGAGAATCCGTTTGAAGGTTGAACAGGTCGCAGATGGGAGTTCTACACAAGAACAGCACAATTCAAAACCAAGCATCGCAGTGGAGAAGAAAGCTGCAGAAGATCATGCTGCTGATGCTGAAAGTGCTACTCGTACTAATCATGCGTATAAACAGCAGAAGGCATCCAAGTCAATTGACAATAGAAAGATTTCACAGAAAGCTGCAAATGCTGGGGGGCTAGGAGACTTTTTATCTGTAGGAAGGGGGCCTTTCAGATCAAAGACTTCCTCAAACCGCGTCACCTTGTGGTCTTCGGTTTTTGTAGTTTCTGCATCCGTACTGGTTTCATTAGTAGCCTTTACTAACATATGGGAATATATTAAGTTTTGA 1785 0.4207 MGSLDCVPSLDHGMAVLPLNSLPLGFRFRPSDEELVDYYLRSKINGNGDEVWVIREIDICKWEPWDMPGLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRRIKSGNILIGMKKTLVFYSGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKNDESLEVSNCGEVEQATPAPLTANYSPEEIQSDQAPITASTSQVTEEDKQLPFIPDVSEETISNVITSVDCHSDGYDAHDAQNQIVKQAAEEDQASILDMYYNPKDGLLLDDRLFSPVLAHMPQEFNYQANNESDGQYGLQYGTNEINISDFLNYNLNWDQLPSEEFSSHQQNFSLFNVIKDNGSGSESEAGSNITGMQAAYSQEAIARSFPSATTPSFNTFDHSGDDQKSNVVLLQNNFQTSFPSDVNYGEVCNVVNGYDQPSNYNNTVMPAESGIIRRARPARDEQLKTNHMQGTAQRRIRLKVEQVADGSSTQEQHNSKPSIAVEKKAAEDHAADAESATRTNHAYKQQKASKSIDNRKISQKAANAGGLGDFLSVGRGPFRSKTSSNRVTLWSSVFVVSASVLVSLVAFTNIWEYIKF* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2957 594 MobiDBLite consensus disorder prediction 481 532 - -
Tpr3g2957 594 MobiDBLite consensus disorder prediction 495 513 - -
Tpr3g2957 594 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 16 458 - -
Tpr3g2957 594 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 458 - -
Tpr3g2957 594 Gene3D NAC domain 31 176 IPR036093 GO:0003677|GO:0006355
Tpr3g2957 594 SUPERFAMILY NAC domain 12 172 IPR036093 GO:0003677|GO:0006355
Tpr3g2957 594 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Tpr3g2957 594 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2957 Tpr-Chr3 31957341 31960833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2957 14 516 NAC Transcription Factor Family AT4G35580 38.566 2.25e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr3g2957 NAM 5.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2957 - - gmx:100777071 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2629 4 29016875 29021457 Tpr3g2957 3 31957341 31960833 PCT