Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2954 ATGTGTTGCAGACCACATTGGTTCTGGTGCTTATATTGCACAATCTACGGAGTTATGTTCTTTTTCATGATGTTCTCAATCATCTTCTGGATAGTAATCTCCCCCACAAGTGTGAAGTTCCATGTAACTGACGCTACTCTCTCCGAGTTCAACCTCACGAACAACAACAACACCTTATATTACAATTTCAAACTCAATATCACAGCACGAAACCCCAACAACAACATAATAGTCTATTATCGAAGAATCACCGCAATTGCTTGGTACAAAGACAACGATTTCGGTTATGTGAGTTTGACACCCTTTGATCAAGGACACAAGAATACCACTTTTCTTGGACCTATAGAGTTTAAAGGGAATACAAAGTTCAAACTTGGACGTAAACAACTTGACGAGTATTTTGAAGAAACGCGTCTTGGGGTTTATAATGATTTGGCTGTTGATTTCGATGTTCGAATTAGAGCTAAATTTGGAGGTTTTAAAAGTGGTCGTTTTAATCCACCGGTTGTGCAGTGTCGTCGTTTGAGAGTTCCTTTAGTTTTTTCGTCCAATGGAACTAACTCATCATGGACATTTTCTTTTAGTAACAGAAGATGTAGTAGTGGTTCTTTCTTTACAGATCGTGATGCAGATGCAGGAGCTTAA 645 0.386 MCCRPHWFWCLYCTIYGVMFFFMMFSIIFWIVISPTSVKFHVTDATLSEFNLTNNNNTLYYNFKLNITARNPNNNIIVYYRRITAIAWYKDNDFGYVSLTPFDQGHKNTTFLGPIEFKGNTKFKLGRKQLDEYFEETRLGVYNDLAVDFDVRIRAKFGGFKSGRFNPPVVQCRRLRVPLVFSSNGTNSSWTFSFSNRRCSSGSFFTDRDADAGA* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2954 214 PANTHER HARPIN-INDUCED 1 18 205 - -
Tpr3g2954 214 PANTHER OS05G0367900 PROTEIN 18 205 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2954 Tpr-Chr3 31834508 31835336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2954 32 186 SNARE and Associated Proteins AT1G32270 32.704 1.92e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2954 - - mtr:MTR_6g070890 362.459