Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2953 ATGTGTTTCAGTTTTCGCTGCTTCGTCTGCCTCTATTGCACAATCTACACGGTTATCTTCTTCTTCGTGGCTTTCACAACCGTCCTCTGGATTGTAATCTCCCCATCCAGTGTTAAATTCCACATAACCGATGCTACTCTCACCGAGTTCAACATTACGAATAACGATACCTTATATTACAATTTCAAAGTCAATGTCACTGCACGAAACCCAAATGATAACATCATAGTCTATTATCGACAAATCACCGCAATTGCTTGGTACAAAGATAACGATTTTGGTTATGTGAGTTTGACACCCTTTGATCAAGGACACAAGAATACAACATTTCTCGGGCCAATTGTGTTTAAAGGGAATCGTACAATCAAACTTGGACATCAACAAATTGAAGAGTATTTTGAAGAGACGCGTCTCGGGATTTATAATGATTTGGCTGTTGATTTCGATGTTCATATTAAAGCTAAATTTGGACGCTTTAAAAGTGGTCGGTTTAATCCACCAATGGTGCAGTGTCGTCGTTTGAGAGTTCCTTTGGTTTCAGCTTCCAATAGTACTCGCTCATTATCATCATTTTCTTTTAGTGAAACAAGATGTAGCAGTGGTTCTTTCTTTACGGATCGTAATGTAAATGCTGGACCTTGA 642 0.3879 MCFSFRCFVCLYCTIYTVIFFFVAFTTVLWIVISPSSVKFHITDATLTEFNITNNDTLYYNFKVNVTARNPNDNIIVYYRQITAIAWYKDNDFGYVSLTPFDQGHKNTTFLGPIVFKGNRTIKLGHQQIEEYFEETRLGIYNDLAVDFDVHIKAKFGRFKSGRFNPPMVQCRRLRVPLVSASNSTRSLSSFSFSETRCSSGSFFTDRNVNAGP* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2953 213 PANTHER OS05G0367900 PROTEIN 17 204 IPR044839 GO:0098542
Tpr3g2953 213 Pfam Late embryogenesis abundant protein 65 163 IPR004864 -
Tpr3g2953 213 PANTHER HARPIN-INDUCED 1 17 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2953 Tpr-Chr3 31816237 31817034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2953 32 185 SNARE and Associated Proteins AT1G32270 28.481 4.32e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2953 - - mtr:MTR_6g070890 318.161