Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2946 ATGGAATCTAAGATGAATAGTTTTGTTGATGATGAGAAGTACAAAGATGAAGATCAAGATTTGGAATTGGAACAAGAAGATGGTGGTGGCCATGAACATGATCATCAAGAGGAAAATAGTGAGATTCTTAAGACAAGAATCTCTAATCATCCTCTCTATGAACTTCTTGTTCAAGCTCACTTGGATTGTTTGAAGGTTAGTGACATTTCTAACATGGAGACAGAGAAAAAAGGTAAGAAGAAAGCAATGAAGAAACCAAACTTGGATATGTTAAGCCAATCTGAGCTTGATCTCTTCATGGAAGCATATTGTTTGGCACTTAATAAGCTAAAAGAAGCAATGGAAGAACCACAACAGAATTCCATGGAATTCATAAACAACATGCATTCACAACTTAGGGAGCTAACTCAAGCAACTACACCTTCACCTACTGAACAAGCAGCTACTACATCTTCAAGTGAATCCACATTCAGAAGAAACCCAACAATTTAA 492 0.3638 MESKMNSFVDDEKYKDEDQDLELEQEDGGGHEHDHQEENSEILKTRISNHPLYELLVQAHLDCLKVSDISNMETEKKGKKKAMKKPNLDMLSQSELDLFMEAYCLALNKLKEAMEEPQQNSMEFINNMHSQLRELTQATTPSPTEQAATTSSSESTFRRNPTI* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2946 163 MobiDBLite consensus disorder prediction 1 40 - -
Tpr3g2946 163 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 26 140 - -
Tpr3g2946 163 PANTHER FUSED COMPOUND LEAF 1 26 140 - -
Tpr3g2946 163 Pfam KNOX1 domain 43 66 IPR005540 GO:0003677|GO:0005634
Tpr3g2946 163 SMART KNOX1_2 41 82 IPR005540 GO:0003677|GO:0005634
Tpr3g2946 163 SMART KNOX2_2 86 137 IPR005541 GO:0003677|GO:0005634
Tpr3g2946 163 MobiDBLite consensus disorder prediction 26 40 - -
Tpr3g2946 163 Pfam KNOX2 domain 93 136 IPR005541 GO:0003677|GO:0005634
Tpr3g2946 163 MobiDBLite consensus disorder prediction 137 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2946 Tpr-Chr3 31621350 31625168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2946 41 138 Homeobox Transcription Factor Family AT4G08150 39.048 2.41e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2946 - - mtr:MTR_6g071190 202.601