Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2907 ATGGAGAAAGAATTCCTTGGCTTCAGTTCCAAAAACAGTCCATGGATTTCTATGAAAGAAGATGCCTCCAACAAAACAAAAGACCCAGTGAAGAGTTTAGGAATGCAGTGGTCATTCTCAAATAAGGGTTCAAACCTTCCTCAATTCTTGTCTTTCAAGAACACTCATGAAGATAGGTCAAGAAACACTGTTATGGATCCAGTAACTTCTTCTGGATATATGACTATTTCAAATAAAGATGCTTTTGAGTCTAATCACAAATCATTCTTGGGTGTGACACAGGAAAATTTGTCCATGGGAAAGCAAGTAGGAAACAAGCATGGAATGACAGTTTATCCTTTGCAATCTTCTGATGCACAATTTTCAGTTTCAAACCAATCTAATAATCAAATGGTTAATTCAGTTACAAGATCACAATCTTTTGGTTCTAAATCCTCTGCCACACCTGTATCTGTTCTTCCATCAATAGGTTCCATAGTTGGTTCTACTGACTTGAGGAATAGGAATTGTTCCAAATCCAATGGTACTATGACAATTTTTTATGGTGGTTCGGTATGTGTATATGATTACATATCTCCCGAGAAGGCTAAGGCTATCATGTTACTAGCTGGAAATGGCACTAAAATGCAACCAGAAATCTCTATTCCTTCCAAAAAAGATGGTTTCAATATAAGCCAATCATACCCCTCACCATTGCCAAGTCCTCTTCCAATGACCTCTCATGTAAGTAGCAACAATGAAGTCACAATAATAAGATCTTTAGGACCTTCAAATGCCCCTACCAACACCTTGGAATCTCCTATTGTTGCTACTTCTGTAGGATCTACACCTACAAAAGTGATTCAACAAGGCTTGCCTCAGGCACGAAAAGCATCGCTGACTCGGTTTTTGGAGAAGCGAAAGGAAAGGGCAATGAGCACATCACCATATTATATGAGCAAGAAATCACCTGAATGCAGTACTCCTGGATCAGACAGTGCTAGTTTCTCCATTGACTTCTCTAGTTCAAGTCCTATACCAGCCACAAACATGCCCTTAAGAAGAACATGTATGGAAGGAATTAGATGA 1068 0.3886 MEKEFLGFSSKNSPWISMKEDASNKTKDPVKSLGMQWSFSNKGSNLPQFLSFKNTHEDRSRNTVMDPVTSSGYMTISNKDAFESNHKSFLGVTQENLSMGKQVGNKHGMTVYPLQSSDAQFSVSNQSNNQMVNSVTRSQSFGSKSSATPVSVLPSIGSIVGSTDLRNRNCSKSNGTMTIFYGGSVCVYDYISPEKAKAIMLLAGNGTKMQPEISIPSKKDGFNISQSYPSPLPSPLPMTSHVSSNNEVTIIRSLGPSNAPTNTLESPIVATSVGSTPTKVIQQGLPQARKASLTRFLEKRKERAMSTSPYYMSKKSPECSTPGSDSASFSIDFSSSSPIPATNMPLRRTCMEGIR* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2907 355 MobiDBLite consensus disorder prediction 305 327 - -
Tpr3g2907 355 ProSiteProfiles Tify domain profile. 170 205 IPR010399 -
Tpr3g2907 355 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 228 355 - -
Tpr3g2907 355 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 35 230 - -
Tpr3g2907 355 Pfam Jas motif 286 311 IPR018467 -
Tpr3g2907 355 MobiDBLite consensus disorder prediction 309 327 - -
Tpr3g2907 355 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 35 230 IPR040390 -
Tpr3g2907 355 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 228 355 IPR040390 -
Tpr3g2907 355 Pfam tify domain 175 204 IPR010399 -
Tpr3g2907 355 SMART tify_2 170 205 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2907 Tpr-Chr3 30758149 30767425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2907 35 316 Tify Gene Family AT3G17860 39.297 3.02e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tpr3g2907 tify 4.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2907 K13464 - gmx:100807288 387.111