Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2890 ATGGATCGAAACAAAAAGGGTGCAGGAGAGGTAGAATTTTTTACCGAGTATGGAGAGGCAAATCGGTACCAAGTCCAAGAAGTTGTTGGGAAAGGAAGTTACGGTGTTGTGGTTTCTGCCGTGGATACTATTACTGGGGAAAAAGTTGCAATTAAGAAAATCAATGAAGTTTTTGAGCATGTATCGGATGCCACACGGATACTAAGAGAAATTAAACTTCTTCGTTTGCTACGACATCCTGATATAGTAGAAATTAAACATATAATGCTTCCACCTTCACGAAGAGAGTTCAAGGATGTCTATGTTGTGTTTGAGTTAATGGAATCTGACCTTCATCAAGTAATTAAAGCAAACGATGATCTTACTCCCGAGCACTATCAATTTTTCTTGTACCAGCTTCTTCGGGGCCTGAAATATACACATACAGCCAATGTGTTTCATCGTGATTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAATTAAAAATATGTGATTTTGGGCTTGCTCGAGTTTCATTTAATGATGCTCCGTCAGCTATATTCTGGACTGACTATGTTGCGACTCGGTGGTATCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACTCCAGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTTAGTGGCAAACCATTGTTTCCTGGGAAGAATGTAGTGCACCAATTGGATCTCATGACTGACTTGCTTGGTACTCCTCCTGCTGAATCCATTTCGAGGATTCGAAATGAGAAGGCTAGAAGGTACCTTAGTAGCATGAGGAAAAAGCAACCAGTTCCATTCTCCAAAAAATTTCCAAATGTAGATCCATTGGCTCTTAATTTGCTGGAGCGTTTACTCGCTTTTGATCCTAAAGACCGTCCATCAGCTGAAGAGGCACTATCTGATCCTTATTTTCATGGTTTGTCAAATGTGGACCGTGAACCATCCACTCAACCCATTTCGAAGCTCGAGTTTGAATTTGAGAGAAGAAAATTGACCAAAGATGATGTTCGAGAATTGATATATCGAGAGATTTTAGAGTATCATCCCCAGATGCTCCAAGAATATCTTAGTGGTGGAGATCAAACAAGCTTCATGTATCCGAGTGGGGTTGACCGGTTCAAGCGACAGTTTGCACATCTTGAGGAACATTATGGGAAAGGTGAAAAAGGCTCTCCATTGTTGAGACAACATGCCTCCTTACCTAGAGAGCGGGTTCCTGCTCCGAAAGATGAAAATAATCAAAATAATGATTGTGAACACCCGACCGGATCAAATCTTCACAGCCCATCAGGCGTAGCAAATTCTGGTGACCAAAACGGACCATCAAACAACACGTCACGTTGTCTGTTGAAGAGTGCCAGCATTAGCGGTTCGAAATGTATAGATGTCAAAAAAAGTAAAGATCCTGAGGAGGAGCCAATTCCAGAGGTCAATGATGAAGCGGTGGACGAGTTGTCGGAGAAGGTTGCTGCTCTCCTTGCTTAG 1515 0.4139 MDRNKKGAGEVEFFTEYGEANRYQVQEVVGKGSYGVVVSAVDTITGEKVAIKKINEVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYTHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPPAESISRIRNEKARRYLSSMRKKQPVPFSKKFPNVDPLALNLLERLLAFDPKDRPSAEEALSDPYFHGLSNVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLSGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGEKGSPLLRQHASLPRERVPAPKDENNQNNDCEHPTGSNLHSPSGVANSGDQNGPSNNTSRCLLKSASISGSKCIDVKKSKDPEEEPIPEVNDEAVDELSEKVAALLA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2890 504 Gene3D Transferase(Phosphotransferase) domain 1 109 337 - -
Tpr3g2890 504 MobiDBLite consensus disorder prediction 427 463 - -
Tpr3g2890 504 ProSiteProfiles Protein kinase domain profile. 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2890 504 MobiDBLite consensus disorder prediction 413 492 - -
Tpr3g2890 504 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 453 - -
Tpr3g2890 504 SMART serkin_6 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2890 504 CDD STKc_TDY_MAPK 22 359 - -
Tpr3g2890 504 Pfam Protein kinase domain 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2890 504 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524
Tpr3g2890 504 SUPERFAMILY Protein kinase-like (PK-like) 17 319 IPR011009 -
Tpr3g2890 504 ProSitePatterns MAP kinase signature. 58 161 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tpr3g2890 504 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 453 - -
Tpr3g2890 504 Gene3D Phosphorylase Kinase; domain 1 39 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2890 Tpr-Chr3 30543257 30549165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2890 8 502 MAP Kinase Gene Family AT3G18040 81.349 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tpr3g2890 Pkinase 2.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2890 - - gmx:100787677 865.914