Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2871 ATGGGGTCACCAACTCCTATCCTTTACTTTCTCCTCCTAATTCTTCTTGTCTCTCTGCATCACACACCATCTTTTGCAGACAAAAAAAAGTCATATGTGGTATACTTAGGAAGCCATTCACATGATTCTTCGGAAATGTCTTCAGTTGACTTTAACAGTGTAACAAATTCTCACTATGAGTTTCTAGGATCTTTCTTAGGAAGTTCTGATACAGCAAAAGATTCAATTTTTTACTCTTACACAAGACATATAAATGGTTTTGCTGCAAATTTGAAAGAAGAAATAGCAGCTGAGATAGCAAAACATCCAAAAGTGTTGTCAGTGTTTGAAAACAATGGAAGGAAATTGCATACAACTCGTTCATGGGGATTCATGGGGTTAGAAGATAATTATGGGGTGATTTCATCTAACTCAATATGGAACAAAGCCAGATTTGGTGATGGTGTCATTATAGCAAACCTTGATACAGGTGTTTGGCCTGAATCTAAGAGCTTTAGTGATGAAGGGTTTGGACCAATTCCATCAAAGTGGAGAGGAATATGTGGTAAAGGGAGTGATCATGGTTTTCATTGCAATAGGAAACTAATTGGAGCAAGATATTTTAACAAAGGCTATGCATCAAGAGTAACCACCCCACTAAACTCAACCTTTGAGACACCTCGCGACAATGAAGGCCATGGATCACACACTCTTTCAACAGCAGGTGGAAACATGGTACAAGGTGTAAATGTCTTTGGTCAAGGAAATGGAACAGCAAAGGGTGGTTCACCAAGAGCAAGAGTTGCATCATACAAAGTTTGTTGTCCTCCCGTTAATGGCGACGAGTGTTTTGATGCAGACATACTTGCAGCTTTTGATATGGCTATCCATGATGGTGTTGATGTCTTGTCTTTGTCACTTGGTGGTTCTGCTTCTAACCTTTTCAATGATAGTGTTGCTATTGGATCTTTTCATGCTGCTAAGAAAGGTATTGTTGTTGTTTGTTCTGCTGGAAATAGTGGACCAAATGAAGCTACTGCAGAAAATCTAGCTCCTTGGTATATTACAGTTGGTGCTAGCACAATGGATAGAGAGTTTCCTAGTTATGTTGTTCTTGGTAACAATTTAAGGTTCAAGGGAGAAAGCTTATCAGCTACAAGATTAAAACACAAATCCTACCCAATTATTAAAGCAACAGATGCTAAATTGGCAAGTGCAACAATTCAAGACGCTGTGCTTTGCCAGAATGGAACACTAGACCCTAACAAGGTGAAGGGTAAAATAGTATTATGCCTGAGAGGAATAAATGCTAGAGTAGACAAAGGAGAACAAGCTCTTCTAGCTGGTGCTGTAGGAATGGTTCTTGCCAATGATATCACTACTGGAAATGAAATTTTAGCTGATCCTCATGTTCTTCCTGCTTCTCACATCAATTTCTCTGATGGTGTAGATGTCTTCAAATACGTCAACTCAACCAAGTCTCCAGTGGCTTATATTACATATCCAACAACAAAATTGCATACTAAACCAGCACCTTTCATGGCAGCATTTTCATCCAAAGGACCAAACACTATTGTACCTGAGATTCTAAAGCCTGATATTACTGCACCAGGAGTGTCAATTATAGCAGCCTACACTGAAGCTGAAGGGCCAACTGACCAAGAGTTCGACAAACGCCGGATTCAGTATAACTCAATATCCGGCACATCGATGTCATGCCCTCACATTTCGGGCATTGTAGGCCTTTTGAAAGCCTTGTATCCTTCTTGGAGTCCTGCTGCTATTAAATCAGCTATCATGACCACCGCTACAACATTAGACAACGAAGCGGAGACAATTCTGAATGCTACTTTCATCCATACAACACCATTTAGCTACAGATCCGGACATGTTCAACCAAACAAAGCAATGGATCCTGGTCTTGTTTACGACACACCAACGAACGATTACGTCAACTTCTTATGTGCTTTAGGCTATAATGAAACACAAATGTCAGTGTTTTTAAAAGCCCCTCACCAATGTCATAAAAAATTTAATATCATCAACCTAAACTATCCTTCAATTACTGTTCCAAATCTCAATCGGTCGGTGACGGTTACAAGGACATTAAAAAACGTTGGTGCTCCAGCGACATACATTGTTCATGTTCAGAATCCAAATGGAATAACTGTTTCTGTGAAGCCAAATGTATTGGAGTTCAAACATGTTGGTGAAGAGAAGAGATTTGAGGTAAAATTGAAGGTGAAGAAAGGAAAAGCAACAAAGAGTTATGTGTTTGGAAAGTTAGTTTGGTCTGATGGGAAACATTATGTTAAGAGTCCAATAGTTGTGAAAGCTATCTAG 2322 0.3936 MGSPTPILYFLLLILLVSLHHTPSFADKKKSYVVYLGSHSHDSSEMSSVDFNSVTNSHYEFLGSFLGSSDTAKDSIFYSYTRHINGFAANLKEEIAAEIAKHPKVLSVFENNGRKLHTTRSWGFMGLEDNYGVISSNSIWNKARFGDGVIIANLDTGVWPESKSFSDEGFGPIPSKWRGICGKGSDHGFHCNRKLIGARYFNKGYASRVTTPLNSTFETPRDNEGHGSHTLSTAGGNMVQGVNVFGQGNGTAKGGSPRARVASYKVCCPPVNGDECFDADILAAFDMAIHDGVDVLSLSLGGSASNLFNDSVAIGSFHAAKKGIVVVCSAGNSGPNEATAENLAPWYITVGASTMDREFPSYVVLGNNLRFKGESLSATRLKHKSYPIIKATDAKLASATIQDAVLCQNGTLDPNKVKGKIVLCLRGINARVDKGEQALLAGAVGMVLANDITTGNEILADPHVLPASHINFSDGVDVFKYVNSTKSPVAYITYPTTKLHTKPAPFMAAFSSKGPNTIVPEILKPDITAPGVSIIAAYTEAEGPTDQEFDKRRIQYNSISGTSMSCPHISGIVGLLKALYPSWSPAAIKSAIMTTATTLDNEAETILNATFIHTTPFSYRSGHVQPNKAMDPGLVYDTPTNDYVNFLCALGYNETQMSVFLKAPHQCHKKFNIINLNYPSITVPNLNRSVTVTRTLKNVGAPATYIVHVQNPNGITVSVKPNVLEFKHVGEEKRFEVKLKVKKGKATKSYVFGKLVWSDGKHYVKSPIVVKAI* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2871 773 SUPERFAMILY PA domain 404 475 IPR046450 -
Tpr3g2871 773 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 16 772 - -
Tpr3g2871 773 Gene3D Peptidase S8/S53 domain 148 643 IPR036852 GO:0004252|GO:0006508
Tpr3g2871 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 117 IPR037045 -
Tpr3g2871 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Tpr3g2871 773 Pfam Fibronectin type-III domain 675 770 IPR041469 -
Tpr3g2871 773 Gene3D - 647 773 - -
Tpr3g2871 773 CDD PA_subtilisin_like 362 492 - -
Tpr3g2871 773 Gene3D - 356 500 - -
Tpr3g2871 773 ProSiteProfiles Serine proteases, subtilase domain profile. 121 630 - -
Tpr3g2871 773 PANTHER PEPTIDASE S8 16 772 - -
Tpr3g2871 773 Pfam Peptidase inhibitor I9 31 117 IPR010259 -
Tpr3g2871 773 CDD Peptidases_S8_3 115 597 IPR034197 -
Tpr3g2871 773 Pfam PA domain 407 476 IPR003137 -
Tpr3g2871 773 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Tpr3g2871 773 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Tpr3g2871 773 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Tpr3g2871 773 SUPERFAMILY Subtilisin-like 117 634 IPR036852 GO:0004252|GO:0006508
Tpr3g2871 773 Pfam Subtilase family 146 601 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2871 Tpr-Chr3 30202068 30211015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2871 31 771 Subtilisin-like Serine Gene Family AT2G04160 63.978 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2871 - - gmx:100794807 1197.19