Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2847 ATGGCGAATGAAAACGACAACACCACAGTCCCACTCACACTCACAGAGAAATCCATTCCTGATGATCGAGAAAAAACAACGGCTACTCTTGATGTTGCCGCCGAAACGACGTCGTTGAAGGACGTTCAAGGTGATGACGTGGCAGCCGAAGATTCTTCTTCTGTTAATCCTGCCGTGACTCCAGCGGTGTACGTTAGAAGGAAACGCAGAGAAAAGAGTTTTGCAGAAATCGAGAGGATGAAGAAAGAGGAAACGTTAAAGAATGGAACGGAAGAAGAAACCGGTAAAGGTGATGATGACGTGGTAGCCGGAGGTTCTATTTCTGTTGAAGTTGCTTCTGTTAAGGGAAAGAAGCGTGGTAGAAATAGAAAAACGGAGAAGGAAGAAGAAACGGGTGAAGGTGATGACGTGGCGGTGAAAGATTTTGGTTATGTTGAAGTGAGAAAGAGTGAGCGGCCGAGGAAGAAGGTATCGTATAAGGAGGATGAGGAAGTGAAGACTAAGGGAAATCGTGGTATGAAGAAGAAGATTATTGCTGATTCTGATGTAAAAAATGTTGCTGCTGAAGAAGGGGAAAATGTGAAGAAAGAGGAGAAGAAGAAGAAGAAACCTGTTAGAAAGAAAAATGAAATTTTTAGTTCTGGAGATGAATTTGAAGCTGAACAAAAGGGAGAAGATGTGAAAAAAGAGGAGAAGAAGAAACCTGATAGAAAAAGAAAGAAAATTTCTCACAAATCTGGTGGAAAAATTAAGATTGAGGATGAACTTGTTGGTGAAAAGAAGTCTGAGAGTGATGTGTTGGAGGTAGAGGATCAGGGCTGTCCTTATTCTCCAAGGAGGACTGCTGTAACAAAGAAACCCAAGGTGCCCAAGGACGAAAGAATTAGGTGGATTGAACAAGAGTCGTTAATGTGCCATCAATGCCAGAGAAACGATAAGGGCAGGGTTGTCAGATGCACAAAGTGCAAAAGGAAAAGATATTGTGTATGCTGTATAAACAACTGGTATCCTCACTTGAAAGAAGATGAAATTGCTAAGGCATGTCCGGTGTGCTGTGGTAATTGCAATTGCAAAGCATGCTTGCGATCATCTACACTTATCAAGGCAATTAAAGAAAGCAATCCACAAACAAACAAAGATGGTGATCGTGATGTTGAGCTCTCCAAGTATATGTTGAAAGAACTTCTTCCTTATTTTAGACGATTGGATGAAGAACAAATGGTCGAGAAGGAGATAGAAGCAAAGAGACAAGGGCTCTCACTTTCTGAGCTAAAAATAGAAGTAGCCGATTGTCCTAAAAATGAGCGGGTGTATTGTGACAACTGCAGAACATCTATATTTGACTACCATAGAAGTTGTACAAAATGCCCTTTTGACATTTGTCTCTTCTGTTGCCGCGAGCTTCGTTGTGGGAAGCTCCTAGGTGGTGCAGATCCAGTTGAGTTTGAGTTTATCTGCCGAGGGCGTGATTATCTGCATGGTGGAAAAGAGAAAATAGAAAAAAATGAACCTCGTGATGCTGTCCAGCCTAAGATTCGTGAATGGTCAAGATCTGAATGGCATGCATACAGTGATGGTAGTATTCCCTGTCCCAAAGTCAATAATGATTGTGATCATGGTTTCCTTGAACTAAGAAGCATGTTTGGACCAAATCACATCTCAGAGTTATTGTGCAAAGCAAAAGAACTGGAAGTAACACTTAATCTACAAGACATAGAGGTGACTCTTGATGGTAGGTGTTCTTGTTTGAAGCCAGAAGATACGCACAGTAACGTAAGGAAGGCAGCTTCTCGTCAAGATTCCAATGATAACTTCTTGTACTGTCCTAAGGCTGTAGATCTACAGAAAAAGGATTTTCGTCATTTTCAATGGCATTGGAGCAAAGGGGAGCCAGTAATTGTCAACAATGTGCTTGAATGTACATCTGGCTTGAGCTGGGAGCCCCTTGTCATGTGGCGTGCATTCCGTCAAATAAGCTCCAAGCATGAATCACTTTTGGATGTGACGGCAATTGATTGCTTAGATTGGTGCGAGGGAGATATTAATGTGCACCAATTCTTTACTGGGTACACAAAAGGTCGCTCGGATTGGCGTAACTGGCCACAGGTATTGAAATTGAAAGATTGGCCTCCTTCTAATTTATTTGAGGAAAGTTTGCCTCGTCATTGTGCCGAGTTCATATCTTCGTTGCCGTATAAAGAATATACAGATCCTTTCAAAGGTGTTCTTAACCTTGCTGTGAAGTTGCCCGAAGGCATTCTAAAGCCAGACATGGGGCCAAAAACATATATTGCTTATGGATTTGCTGAGGAGCTTGGACGTGGTGATTCTGTGACTAAGCTCCATTGTGACATGTCCGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGGAATTGAATCCTGATAGTATTAAAGCCATTAAGGAACTGACACAAAAGCATCTCAAGCAAGACAAGAGAGAGCTACATCTTCATCGTGGTAATCAGGTTGTTGATCCAGTTCGTGAACACTCGGTTGCTGATGATGATGGCCTTTCTTCTGAATCAGAGCTCAATGAGGTTGATGAAATGACAGTGAAAAAGGAAAATAGTTTGTTGGTAGGGGGGGATTCTGTAGATGGTGCTCTCTGGGATATATTTCGGAGAGAGGATGTACCTAAATTGGAGGAATATTTAAAGAATCATTTCAGAGAGTTCCGGCATTTGCACTGCTCTCCTTTAAATCAGGTTGTTCACCCTATCCATGATCAAACATTTTATTTGACTGTCGACCATAAGAAGAGTCTTAAGGAGGAGTATGGAATTGAGCCCTGGATTTTTGTTCAGAAACTAGGAGATGCAGTTTTCATTCCAGCTGGTTGTCCTCACCAAGTCCGAAATCTGAAGTCATGCACCAAAGTCGCACTAGATTTTGTCTCTCCGGAAAATGTTGGTGAGTGCTTTCGTTTGACAGAGGAATTCCGGAAACTTCCAATCAATCACAGGTCCACAGAGGACAAATTGGAGGTCAAGAAAATGATTGTATATGCAATGCTTGATCTGGTCAAAAACTTGGAGGAAGCAAGGAATGGAGAAACTGAGGTTCCAAAGTAA 3096 0.4186 MANENDNTTVPLTLTEKSIPDDREKTTATLDVAAETTSLKDVQGDDVAAEDSSSVNPAVTPAVYVRRKRREKSFAEIERMKKEETLKNGTEEETGKGDDDVVAGGSISVEVASVKGKKRGRNRKTEKEEETGEGDDVAVKDFGYVEVRKSERPRKKVSYKEDEEVKTKGNRGMKKKIIADSDVKNVAAEEGENVKKEEKKKKKPVRKKNEIFSSGDEFEAEQKGEDVKKEEKKKPDRKRKKISHKSGGKIKIEDELVGEKKSESDVLEVEDQGCPYSPRRTAVTKKPKVPKDERIRWIEQESLMCHQCQRNDKGRVVRCTKCKRKRYCVCCINNWYPHLKEDEIAKACPVCCGNCNCKACLRSSTLIKAIKESNPQTNKDGDRDVELSKYMLKELLPYFRRLDEEQMVEKEIEAKRQGLSLSELKIEVADCPKNERVYCDNCRTSIFDYHRSCTKCPFDICLFCCRELRCGKLLGGADPVEFEFICRGRDYLHGGKEKIEKNEPRDAVQPKIREWSRSEWHAYSDGSIPCPKVNNDCDHGFLELRSMFGPNHISELLCKAKELEVTLNLQDIEVTLDGRCSCLKPEDTHSNVRKAASRQDSNDNFLYCPKAVDLQKKDFRHFQWHWSKGEPVIVNNVLECTSGLSWEPLVMWRAFRQISSKHESLLDVTAIDCLDWCEGDINVHQFFTGYTKGRSDWRNWPQVLKLKDWPPSNLFEESLPRHCAEFISSLPYKEYTDPFKGVLNLAVKLPEGILKPDMGPKTYIAYGFAEELGRGDSVTKLHCDMSDAVNVLTHIAEVELNPDSIKAIKELTQKHLKQDKRELHLHRGNQVVDPVREHSVADDDGLSSESELNEVDEMTVKKENSLLVGGDSVDGALWDIFRREDVPKLEEYLKNHFREFRHLHCSPLNQVVHPIHDQTFYLTVDHKKSLKEEYGIEPWIFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEFRKLPINHRSTEDKLEVKKMIVYAMLDLVKNLEEARNGETEVPK* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2847 1031 ProSiteProfiles Zinc finger RING-type profile. 305 351 IPR001841 -
Tpr3g2847 1031 MobiDBLite consensus disorder prediction 1 25 - -
Tpr3g2847 1031 MobiDBLite consensus disorder prediction 79 99 - -
Tpr3g2847 1031 ProSiteProfiles JmjC domain profile. 738 989 IPR003347 -
Tpr3g2847 1031 MobiDBLite consensus disorder prediction 1 15 - -
Tpr3g2847 1031 Pfam JmjC domain, hydroxylase 877 972 IPR003347 -
Tpr3g2847 1031 MobiDBLite consensus disorder prediction 208 233 - -
Tpr3g2847 1031 MobiDBLite consensus disorder prediction 79 255 - -
Tpr3g2847 1031 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 63 1021 IPR045109 GO:0032454|GO:0033169
Tpr3g2847 1031 SMART cupin_9 719 989 IPR003347 -
Tpr3g2847 1031 MobiDBLite consensus disorder prediction 122 199 - -
Tpr3g2847 1031 CDD cupin_RmlC-like 913 973 - -
Tpr3g2847 1031 SUPERFAMILY Clavaminate synthase-like 618 1009 - -
Tpr3g2847 1031 Gene3D Cupin 603 998 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2847 Tpr-Chr3 29769811 29778588 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tpr3g2847 JmjC 7.7e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2847 K15601 - gmx:100805723 1091.64