Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2824 ATGGGTGGTGGTAGAACTAGAAAGAAGAGGAACCAGTTGAGCAGAATCCATGCATTCTCAAGTGGGAAAACTTCATTCAAAGGTGAACATTCACTTATAGGAGGACCTGGTTTTGGAAGGATAGTTTACTGCGACGAAAACGAAAGTAGTACTGTTGTGAATTATTGTGATAATTATGTGAGAACTACAAAATATACAATGTTCACTTTCATCCCTAAATCATTGTTTGAGCAATTCAGAAGAATTGCAAATTTTTACTTCCTTGTTTGTGCAATCTTGTCTTTTTTTCCTGTTTCTCCTTACTCAGCTGTTAGCAATGTTGTTCCTCTTGTTGTTGTGGTTGCTGCTACAATTGGGAAAGAGGCTGTTGAAGATTGGAGAAGGATGAAGCAGGATATCGAGATGAATAACAGAAAGGTTAAAGTCCATAAAAGAGAAGGTGTTTTTGACTACTCTAAATGGCGTGATTTGGAAGTTGGAGACATAGTGAAGGTTGAAAAAGATGAATTTTTTCCTGCTGATCTCATCCTACTTTCATCAAGCTATGATGATGCAATTTGCTATGTTGAAACAATGAATCTCGATGGAGAAACAAATCTTAAACTCAAACAAGCACTTGAAGAAACTTCCAAATTTCAAGAAGACTCCACCTTCCGAAATTTCAAAGCAATCATTAAATGTGAAGATCCAAATGCATATCTATACTCTTTCATAGGAAACATTGAGCTTGAAGATCAACTATATCCGCTTTCGCCTCAGCAGTTACTGCTTAGGGACTCAAAGCTTAGGAACACTGATTTTATATACGGCGTAGTTATCTTTACTGGCCATGATACAAAAGTTATGCAGAATTCAACCGACCCTCCATCTAAGAGAAGCAAAGTTGAGAAGCGAATGGATAAGATAATCTACTTTCTCTTCTCAGTTTTGTTTTTTATTTCTTTTATTGGTTCCATTTTCTTCGGCATTGCAACAAGTGAGGATCTTGAAAATGGAGTAATGAAGAGATGGTACCTCAGACCAGATGATACTACCATCTACTACAATCCGAAGAAAGCTCCGATTGCGGCAATGCTCCATTTCTTGACTGCACTAATGTTGTATAGTTACTTGATTCCAATTTCTTTGTATGTCTCCATTGAAATTGTGAAAGTCCTTCAAAGCATTTTCGTCAATCACGATGTACACATGTATTACGAGGAAACTGACCAGCCTGCACGCGCTCGTACCTCAAATTTGAATGAAGAACTTGGTCAAGTTGATACTATTCTTTCGGATAAAACAGGAACTTTGACTTGTAATTCTATGGAATTCGTCAAGTGTTCAATTGCTGGGATCGCCTACGGACGAGGTGCTACAGAAATTGAGAGAGCTCTAGCGAGGAGAAAAGACTTAGATGGCAATGTTGCGGAGATTTCTGAAGCAAAGTCATCCATTAAAGGTTTTAACTTCATGGATGAAAGGATTATGAATGGAAATTGGGTCAAGGAACGTCACGCCAATGTAATCCAGAAATTCATGCGTTTGTTGGCAGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACCGGCAACGTTTCTTATGAAGCCGAGTCACCGGATGAGGCAGCTTTTGTAATTGCAGCTAAGCAACTTGGATTTGAGTTTTATGAAAGGTCCCAGACAACTATTTCCCTGCACGAGTTCAATTCCATAACAGGCAGGACTATTAGAAGGTCCTACAAACTTTTGAATATATTAGAGTTTAGTAGTGCAAGAAAAAGAATGTCTGTTATTGTACGAGATGAGGAGGGGAAACTGCTACTTCTTAGCAAAGGGGCTGACAGTGTCATGTTTGAACGGCTTGGAAAAAATGGAAGGCAGTTTGAAGAAAAGACTAAGCAGCACATTAATGAATATGCTGATGCTGGTTTGAGGACCTTGATACTTGCCTATCGCGAAGTTGATGAAGAAGAGTACGATCTTTTCAATAAAGAATTGATGGAAGCCAAAAGCTTAGTAAGTGCAGATCGGGAGCAGATTGTGGAGGAAGTATTAGAAAAGATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTTCAAATTGGGGTTCCTGAATGCATTGACAAGCTAGCGCAGGCAGGAATTAAATTATGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATGTTGGGTTTGCTTGTAGTTTACTTAGGCAAGGGATGAAGCAAATTATAATTAGTTCAGACACTCCAGATATCAAATCGCTCGAGAAAGTGGAGAATAATTCAGCTGCTGCTTTTGCAATCAAGGCAAACGTTCTTTCTCATTTAAGGGAAGGAAAGGAATTACTTGCTGCATCTAATGTAAAATCTGAGGCATTAGCTCTAGTAATTGATGGCAAGTCTCTCACATATGCACTAGAAGATGATGTAAAAGACTTGTTTCTTGCCTTTGCAGTTGGTTGCGCATCTGTTATATGCTGTCGTTCATCTCCAAAGCAAAAAGCACTTGTTACTAGACTAGTAAAGATTAAAACAGGTTGCACTACTCTAGCAATTGGTGATGGTGCAAATGACGTTGGAATGCTTCAAGAAGCAGATATTGGTATTGGCATCAGTGGCGTTGAAGGAATGCAGGCAGTTATGTCCAGTGATATTGCAATTGCTCAATTTCGGTATCTAGAGCGTTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATCTGTTACTTCTTTTACAAGAATATTGCCTTTGGCATCACTCTATTCCTGTATGAGATTTATGCCTCATTTTCGGGGCAAGTTGCATACAATGATTGGTTCCTGTCACTATATAATGTATTCTTCACTTCCCTTCCTGTAATTGCTTTGGGAGTATTTGACCAAGATGTCTCTGCTAGATTATGTCTCAAGTTCCCATTATTATATCAAGAAGGTGTACAAAATGTCCTATTTAGCTGGAAAAGGATTCTAGGTTGGGCATTCAATGGAGTAATGAGTGCTATCACGGTATTCTTCTTCTGCATTAATGCGATTGAGAATCAAGCATTCCGCAAAGGAGGCGAAATAGTTGGACTTGAAGTTCTTGGTGCAACAATGTACACATGTGTTGTGTGTGTAGTGAATTGTCAAATGGCATTATCCATAACTTACTTCACTTACATACAACATTTATTCATCTGGGGTGGCATTCTTTTTTGGTATATTTTCCTCCTAATATATGGAACTATTAACCCTTTATTATCAACCACTGCTTATAAAGTCCTAATTGAAGCTTGTGCACCAGCACCATCTTACTGGCTCATAACTCTCCTTGTCCTTGTTGCTTCACTCCTTCCGTATCTTGTATACACTTCGATCCAATTGCGGTTCTTTCCTATGTTCAATCAAATGATACAGTGGAGAAGTAATGATGGGCATGTAATTGATCCAGAATATGTTAATGCTGTGCGACAACGATCAATAAGACATATAAAAGTTGGATTCACTGCTCGATTCGAAGCATCAAAGACTTCACGCGGCTGA 3543 0.3872 MGGGRTRKKRNQLSRIHAFSSGKTSFKGEHSLIGGPGFGRIVYCDENESSTVVNYCDNYVRTTKYTMFTFIPKSLFEQFRRIANFYFLVCAILSFFPVSPYSAVSNVVPLVVVVAATIGKEAVEDWRRMKQDIEMNNRKVKVHKREGVFDYSKWRDLEVGDIVKVEKDEFFPADLILLSSSYDDAICYVETMNLDGETNLKLKQALEETSKFQEDSTFRNFKAIIKCEDPNAYLYSFIGNIELEDQLYPLSPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKVEKRMDKIIYFLFSVLFFISFIGSIFFGIATSEDLENGVMKRWYLRPDDTTIYYNPKKAPIAAMLHFLTALMLYSYLIPISLYVSIEIVKVLQSIFVNHDVHMYYEETDQPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGIAYGRGATEIERALARRKDLDGNVAEISEAKSSIKGFNFMDERIMNGNWVKERHANVIQKFMRLLAVCHTAIPEVDEETGNVSYEAESPDEAAFVIAAKQLGFEFYERSQTTISLHEFNSITGRTIRRSYKLLNILEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLGKNGRQFEEKTKQHINEYADAGLRTLILAYREVDEEEYDLFNKELMEAKSLVSADREQIVEEVLEKIEKDLILLGATAVEDKLQIGVPECIDKLAQAGIKLWVLTGDKMETAINVGFACSLLRQGMKQIIISSDTPDIKSLEKVENNSAAAFAIKANVLSHLREGKELLAASNVKSEALALVIDGKSLTYALEDDVKDLFLAFAVGCASVICCRSSPKQKALVTRLVKIKTGCTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIAFGITLFLYEIYASFSGQVAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWKRILGWAFNGVMSAITVFFFCINAIENQAFRKGGEIVGLEVLGATMYTCVVCVVNCQMALSITYFTYIQHLFIWGGILFWYIFLLIYGTINPLLSTTAYKVLIEACAPAPSYWLITLLVLVASLLPYLVYTSIQLRFFPMFNQMIQWRSNDGHVIDPEYVNAVRQRSIRHIKVGFTARFEASKTSRG* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2824 1180 Coils Coil 455 475 - -
Tpr3g2824 1180 Gene3D - 114 286 - -
Tpr3g2824 1180 Gene3D - 690 894 IPR023214 -
Tpr3g2824 1180 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 1178 - -
Tpr3g2824 1180 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1132 IPR023298 -
Tpr3g2824 1180 CDD P-type_ATPase_APLT_Dnf-like 57 1014 - -
Tpr3g2824 1180 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Tpr3g2824 1180 PRINTS P-type cation-transporting ATPase superfamily signature 740 750 - -
Tpr3g2824 1180 PRINTS P-type cation-transporting ATPase superfamily signature 854 873 - -
Tpr3g2824 1180 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 692 IPR023299 GO:0000166
Tpr3g2824 1180 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 5 1178 - -
Tpr3g2824 1180 SUPERFAMILY Calcium ATPase, transduction domain A 143 284 IPR008250 -
Tpr3g2824 1180 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 818 937 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g2824 1180 Pfam Phospholipid-translocating P-type ATPase C-terminal 882 1132 IPR032630 -
Tpr3g2824 1180 Pfam Phospholipid-translocating ATPase N-terminal 42 105 IPR032631 -
Tpr3g2824 1180 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1139 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Tpr3g2824 1180 SFLD p-type atpase 408 905 IPR044492 -
Tpr3g2824 1180 SFLD Haloacid Dehalogenase 408 905 - -
Tpr3g2824 1180 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Tpr3g2824 1180 Pfam Cation transport ATPase (P-type) 513 617 - -
Tpr3g2824 1180 SUPERFAMILY HAD-like 419 909 IPR036412 -
Tpr3g2824 1180 Gene3D - 530 689 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2824 Tpr-Chr3 29472103 29483043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2824 2 1178 Primary Pumps ATPases AT1G68710 68.144 0.0 1744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2824 K01530 K14802 gmx:100797039 1961.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2824 3 29472103 29483043 Tpr3g2824 3 29472103 29483043 ECH