Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2821 ATGACGGAAGCAGAAACAACTCCTTCATTCGTTCGTTCTTATCCATCCAGTTACTACAACAAAAAAAAGAAAAAAAAATCTTCTCTCTTTGTTTTCATCAATAAATTTATCATCATCAGTCATGTCCCTTCACCGCCGATCTTCAATCAGTTGATTTCTTCCTTCCTACCTTTTCATCTTCTTATTCAATCGATCGAGATAAAAAAAAATATGGAGCCCATGGATATTGTTGCAAAGTCAAAGGAAGATGCTTCGCTTCCAAAAGCAACGATGACTAAAATTATTAAAGAGATGTTGCCCCCTGATGTTCGTGTTGCAAGAGATACCCAGGATTTGTTGATTGAATGTTGTGTAGAGTTCATAAACCTCGTCTCATCAGAGTCAAATGAAGTATGTAACAGAGAAGAAAGAAGGACGATTGCACCTGAGCATGTATTGAAGGCTTTAGGGGTTCTTGGATTTGGCGATTACATTGAGGAAGTTTATGCAGCATATGAACAGCACAAGACGGAGACATTGCAGGACAATGGAAAAGGTGCCAAGTGGAGTGGTGCAGCTGAGATGACAGAAGAACAAGCATTAGCGGAGCAGCAAAGGATGTTTGCAGAGGCACGTGCTAGAATGAATGGAGGGACCATTTCTTCCAATCAACCCGATGCTGACCAAAGTTTAGAAAACTAA 681 0.4009 MTEAETTPSFVRSYPSSYYNKKKKKKSSLFVFINKFIIISHVPSPPIFNQLISSFLPFHLLIQSIEIKKNMEPMDIVAKSKEDASLPKATMTKIIKEMLPPDVRVARDTQDLLIECCVEFINLVSSESNEVCNREERRTIAPEHVLKALGVLGFGDYIEEVYAAYEQHKTETLQDNGKGAKWSGAAEMTEEQALAEQQRMFAEARARMNGGTISSNQPDADQSLEN* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2821 226 Gene3D Histone, subunit A 74 212 IPR009072 GO:0046982
Tpr3g2821 226 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 84 149 IPR003958 -
Tpr3g2821 226 MobiDBLite consensus disorder prediction 209 226 - -
Tpr3g2821 226 PANTHER PROTEIN DR1 HOMOLOG 71 225 IPR044255 -
Tpr3g2821 226 SUPERFAMILY Histone-fold 82 212 IPR009072 GO:0046982
Tpr3g2821 226 Coils Coil 185 205 - -
Tpr3g2821 226 MobiDBLite consensus disorder prediction 207 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2821 Tpr-Chr3 29431914 29435584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2821 71 219 CCAAT-DR1 Transcription Factor Family AT5G23090 81.879 1.31e-88 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Tpr3g2821 CBFD_NFYB_HMF 5.7e-21 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2821 K21751 - gmx:547635 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2821 3 29431914 29435584 Tpr3g2821 3 29431914 29435584 ECH