Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2809 ATGGATGGAAACAAAGACGATGCATTGAAATCATTGAAAATCGGTAAAGAAGCGTTAGAAAGTGGAGATCGTAATCGTGCTTTGAAGTTTCTTAACAAAGCTCGCCGTCTCGATCCAACTCTTCCAATCGATGATCTGCTTTCCACCATAGACAGCGATGCAGGCGATCATCCCACAGCAGCTGCTGAGCCGCGGCCTAATCAATCGGATCAACCCTCTATTCGTCGAAGGACTGCCTCTCCGGCGCATGGGATTTCGTCGTCGTCAACATCATATAGTGAGGAGCAGGTTTTGATTATAAGAGAAATTAAGAGGAAGAAGAATTATTATGATATTTTAGGGTTGGAGAAGAATTGCACTGTAGATGATGTGCGAAAATCGTATAGGAAGCTGTCTTTGAAGGTTCATCCTGACAAGAACAAAGCCCCGGGAGCTGAGGAGGCGTTTAAGTCCGTTTCGAAGGCTTTTCAGTGTCTTAGTAATGAGGAGAGTAAGAGAAAGTATGATCTTTCCGGAGAAGATGAGATTGTCTATGAAAGGCGTGCAGCTGCGAGGCCCGCTGCTAGAGGTTTTAATGGTTACTATGAGGCTGATATTGATGCTGAGGAAATATTTAGGAATTTCTTCTTTGGAGGAATGGCACCTGCTGCTAATTTTGGTGGGTTTAGTTTTGGTGGACCGGGGATGGCTCATCGACAGGCTGCTGCTGATAATGGCTCTGGCGGGTTCAATGTTCGTGCTTTGATTCAGTTGCTTCCGGTGCTTCTTATTTTGCTTCTTAACTTTTTACCTTCGTCGGATCCGGTGTATACTCTTCAGCAGAACTATCCTTATGAACACCGGCTTACTACACCGAAGGGCGTTAACTACTATGTTAAGTCTACTAAGTTTGAAGAAGATTATCCGTTGGATAGCCGTGAACGTGTTACGATTGAGGAACGGGTTGAGAGGGAATACTTTGGTATTCTTCGCCAGAATTGTCAGTTTGAGATTCAGCGACGCCAGTGGGGATATATCCGGGAAACACCTCACTGCGATATGCTTCGGAAGTTTGATTTGGTCCGTTGA 1068 0.4504 MDGNKDDALKSLKIGKEALESGDRNRALKFLNKARRLDPTLPIDDLLSTIDSDAGDHPTAAAEPRPNQSDQPSIRRRTASPAHGISSSSTSYSEEQVLIIREIKRKKNYYDILGLEKNCTVDDVRKSYRKLSLKVHPDKNKAPGAEEAFKSVSKAFQCLSNEESKRKYDLSGEDEIVYERRAAARPAARGFNGYYEADIDAEEIFRNFFFGGMAPAANFGGFSFGGPGMAHRQAAADNGSGGFNVRALIQLLPVLLILLLNFLPSSDPVYTLQQNYPYEHRLTTPKGVNYYVKSTKFEEDYPLDSRERVTIEERVEREYFGILRQNCQFEIQRRQWGYIRETPHCDMLRKFDLVR* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2809 355 SUPERFAMILY Chaperone J-domain 104 224 IPR036869 -
Tpr3g2809 355 PANTHER AT29763P-RELATED 1 352 - -
Tpr3g2809 355 Pfam DnaJ domain 108 169 IPR001623 -
Tpr3g2809 355 CDD DnaJ 108 161 IPR001623 -
Tpr3g2809 355 PRINTS DnaJ domain signature 110 128 IPR001623 -
Tpr3g2809 355 PRINTS DnaJ domain signature 128 143 IPR001623 -
Tpr3g2809 355 PRINTS DnaJ domain signature 144 164 IPR001623 -
Tpr3g2809 355 MobiDBLite consensus disorder prediction 48 89 - -
Tpr3g2809 355 ProSiteProfiles dnaJ domain profile. 108 172 IPR001623 -
Tpr3g2809 355 Gene3D DnaJ domain 104 219 IPR036869 -
Tpr3g2809 355 PANTHER - 1 352 - -
Tpr3g2809 355 Pfam Domain of unknown function (DUF1977) 264 335 IPR015399 -
Tpr3g2809 355 MobiDBLite consensus disorder prediction 64 89 - -
Tpr3g2809 355 SMART dnaj_3 107 164 IPR001623 -
Tpr3g2809 355 ProSitePatterns Nt-dnaJ domain signature. 149 168 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2809 Tpr-Chr3 29164687 29166350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2809 4 180 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 25.824 1.73e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2809 K09518 - gmx:100788812 531.176