Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2800 ATGACAGAATTAGATCTGTCTAAGAAAGTAGCTGATAGGTATCTCAAACGTGAGGTCCTTGGTGAAGGTACCTACGGTGTTGTCTACAAAGCCATTGATACTCAGACAGGACAGACGGTTGCTATTAAGAAGATTCGGATTGGCAAGCAGAAAGAAGGGGTGAATTTTACAGCTCTTAGAGAAATTAAATTGCTTAAAGAACTCAAAGATCCAAATATAATTGAGTTGATTGATTGCTTCCCGCATAAAGGGAATTTGCATCTTGTGTTTGAATTCATGGAGACAGACCTTGAAGCTGTCATAAGAGATCGAAATATTTTCCTTTCACCTGGTGACATTAAATCTTACCTTCAAATGACGCTAAAAGGTCTTGCTCATTGTCACAAAAAATGGGTATTGCACAGGGATATGAAACCAAATAATTTGTTGATAGGACCCAACGGACAGTTGAAACTTGCCGATTTTGGTTTAGCACGGATATTTGGTAGCCCAGATCGCAGATTCACTCATCAGGTATTTGCGCGGTGGTATAGAGCACCTGAACTATTATTTGGCACCAAGCAGTATGGCCCAGGGGTAGATGTTTGGGCTGCAGCTTGTATATTTGCTGAGCTTCTTCTTCGTCGACCCTTTTTGCAGGGCTCAAGTGATATTGATCAATTAGGAAAGATTTTCGCAGCATTTGGAACTCCATCTCCATCTCAGTGGCCTGACATGTTATACCTTCCAGATTATGTTGAATATCAATACGTGCCTCCCCCTCCTTTGCGTTCTTTATTTCCAATGGCAACTGATGATGGTTTAGACTTGTTGTCTAAGATGTTTACGTATGACCCAAAAGAGAGAATTTCAGTGCAGCAGGCATTAGAACACAGATACTTTTCATGTCCTCCTCCGCCCACAGATCCAGAAAAGCTTCCAAGACCTGCCCCGAAGAGGGAAATTAAGGAATCAGATTTGAATCCACATGAGGGTCCAACTGTCTTATCACCTGCGAGGAAGTCTAGGAGAGTAATGCGTGATGGATTTGAAGGAAATTCTTTGCAAGGAGATAAGATTGATGATAATCATGCTAACCTCAAACAGACTGTTGGCGATAATGCAGGGACGAATGACCAAGCACCAATGTCACTAGATTTTTCTGTCTTTGGATTAAAACCTCCAAATCGGCCAACAATTAACAGTGCTGACAGATCACATTTAAAAAGAAAATTAGATCTAGAATTCCAGTAA 1233 0.4104 MTELDLSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRIGKQKEGVNFTALREIKLLKELKDPNIIELIDCFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPGDIKSYLQMTLKGLAHCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPSPSQWPDMLYLPDYVEYQYVPPPPLRSLFPMATDDGLDLLSKMFTYDPKERISVQQALEHRYFSCPPPPTDPEKLPRPAPKREIKESDLNPHEGPTVLSPARKSRRVMRDGFEGNSLQGDKIDDNHANLKQTVGDNAGTNDQAPMSLDFSVFGLKPPNRPTINSADRSHLKRKLDLEFQ* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2800 410 MobiDBLite consensus disorder prediction 314 338 - -
Tpr3g2800 410 CDD STKc_CDK7 13 307 IPR037770 GO:0005675|GO:0008353|GO:0070985
Tpr3g2800 410 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2800 410 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Tpr3g2800 410 SUPERFAMILY Protein kinase-like (PK-like) 9 300 IPR011009 -
Tpr3g2800 410 PANTHER CYCLIN-DEPENDENT KINASE D-2 9 355 - -
Tpr3g2800 410 MobiDBLite consensus disorder prediction 366 410 - -
Tpr3g2800 410 PANTHER CELL DIVISION PROTEIN KINASE 9 355 - -
Tpr3g2800 410 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
Tpr3g2800 410 SMART serkin_6 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2800 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Tpr3g2800 410 ProSitePatterns Protein kinases ATP-binding region signature. 20 49 IPR017441 GO:0005524
Tpr3g2800 410 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2800 410 MobiDBLite consensus disorder prediction 396 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2800 Tpr-Chr3 28951238 28960050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2800 8 409 Core Cell Cycle Gene Families AT1G73690 74.938 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Tpr3g2800 Pkinase 6.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2800 K02202 - gmx:100814263 733.406