Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2788 ATGAAGAATTTGAACTGGCATAAACAAATTTCTAACAATGGAAAGTCTGGGAAGAGGCTTTCACTTGGAGAGTACAAAAGAGCAGTTTCTTGGTCTAAGTATTTGGTTTCATCTGGTGCTGCAATAAAGGATGAAGAAGAAGATGAATGGAGTGCTGATATGTCTCAGTTGTTTATTGGATCTAAATTTGCTTCTGGAAGACATAGTAGAATCTATAGAGGTCTTTACAAGCAAAAGGATGTTGCAATTAAGCTTGTGAGTCAACCTGAAGAAGATGAAGATTTGGCTTCTTTTCTTGAGAAGCAATTTACTTCTGAGGTTGCTTTGCTTTTGAGGTTAAGGCATCCAAATATCCTTACTTTCATCGCTGCTTGCAAGAAACCACCAGTGTTCTGCATAATTACCGAATATTTAGCCGGTGGTTCATTGAGAAAATACCTTCATCAACAAGAACCGCATTCAGTTCCACTTGAACTTGTTCTGAAACTAGCCTTAGACATTGCAAGGGGAATGAAATATCTTCATTCTCAAGGGATACTTCATAGGGATCTCAAATCTGAGAATCTCCTTTTAGGAGAAGATATGTGTGTAAAGGTGGCTGATTTTGGTATCTCATGCTTAGAATCTCAGTGTGGAAGTGCTAAAGGATTTACCGGAACCTACCGTTGGATGGCTCCTGAAATGATCAAAGAAAAACATCATACTAAAAAAGTTGATGTGTATAGTTTTGGTATTGTTCTTTGGGAGCTTTTAACTGCATTGACTCCATTTGACAACATGACACCAGAGCAGGCTGCATTTGCAGTTTCCTACAAGAATGCAAGACCACCACTGCCATCTGAATGTCCATGGGCATTTAGTAATCTGATCAATAGATGTTGGTCAAGCAATCCAAATAAAAGGCCACATTTTGTTGAGATTGTATCAATTTTGGAGAGCTTTATTGAATCACTTGAGCTTGATCCACATTTTTTCTCAACTTACAAACAGCAACCTACTAATTTAATTCTGGGGTGCTTCCCTAAATGCAAAGCAAATTAA 1041 0.3794 MKNLNWHKQISNNGKSGKRLSLGEYKRAVSWSKYLVSSGAAIKDEEEDEWSADMSQLFIGSKFASGRHSRIYRGLYKQKDVAIKLVSQPEEDEDLASFLEKQFTSEVALLLRLRHPNILTFIAACKKPPVFCIITEYLAGGSLRKYLHQQEPHSVPLELVLKLALDIARGMKYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVSYKNARPPLPSECPWAFSNLINRCWSSNPNKRPHFVEIVSILESFIESLELDPHFFSTYKQQPTNLILGCFPKCKAN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2788 346 CDD STKc_MAP3K-like 64 311 - -
Tpr3g2788 346 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Tpr3g2788 346 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Tpr3g2788 346 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Tpr3g2788 346 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Tpr3g2788 346 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Tpr3g2788 346 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 332 - -
Tpr3g2788 346 Gene3D Phosphorylase Kinase; domain 1 46 138 - -
Tpr3g2788 346 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2788 346 Pfam Protein tyrosine and serine/threonine kinase 60 311 IPR001245 GO:0004672|GO:0006468
Tpr3g2788 346 Gene3D Transferase(Phosphotransferase) domain 1 140 334 - -
Tpr3g2788 346 SUPERFAMILY Protein kinase-like (PK-like) 43 311 IPR011009 -
Tpr3g2788 346 PANTHER SERINE-THREONINE PROTEIN KINASE 1 332 - -
Tpr3g2788 346 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2788 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2788 Tpr-Chr3 28675038 28679201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2788 30 319 MAP Kinase Kinase Kinase AT1G62400 65.646 4.29e-139 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tpr3g2788 PK_Tyr_Ser-Thr 4.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2788 - - gmx:100807757 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2788 3 28675038 28679201 Tpr3g2788 3 28675038 28679201 ECH