Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2767 ATGCAGTCCACTGCTTTCACTCTCCCCCCTTCTCTCCCTCTCCGCCACACCAACCCCAACCGTTTCAACCGTTCTCTTAACCTCCTCCGTCTCTCCGCCAAATCAAACGATGTCGCTTCTTCTTCTTCTCCTTCTTTCACTCGTCAATCCTGGTCCCTTTCTCCTTCATCTTCTTTCAAGTTCAGACCTCAACCTCTCCTTTCTCCTCCTAAAGCTACTTCCGTTCCCGAAAGCGCCGGTCAATCCGCCGCCGACTCTAGTTCCTTACTCAAAACTCTTCAACTTGGTTCCTTGTTCGGTTTATGGTACCTCTTTAACATCTACTTCAATATCTACAACAAACAGGTTTTGAAGGCGTGTCATTTCCCTGTAACTGTAACTGTAGTTCAATTTGCTGTTGGAACTGTTCTTGTTAGCGTTATGTGGGCTCTTAATCTATACAAGAGACCTAAAATCACTGGTGCCATGCTCGCAGCGATATTTCCACTCGCGGTGGTGCATACTTTGGGGAATCTTTTCACTAATATGAGTCTTGGAAAGGTGGCTGTGTCATTTACTCATACCATTAAAGCTATGGAGCCTTTCTTTTCTGTCATCCTTTCTGCCATGTTCCTTGGAGAGATGCCTACACCTTGGGTGGTTGGTTCCCTCCTGCCTATTGTTGGGGGAGTTGCACTGGCGTCTGTTACTGAGGCCTCGTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATGTGACAAACCAATCACGTAATGTTCTTAGCAAAAAGGTCATGGTTAAGCAAGAGGAATCCTTGGACAACATAACTCTCTTCTCTATAATAACAATAATGTCCTTCTTCTTGTTAGCACCCGCGGCTATCTTCATGGAGGGTGTCAAATTTACCCCTGCTTACCTGGAATCTGTTGGCTTAAATGTCAGGCAAGTGTACACCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATATCAGCAAGTTTCTTACATGATATTGCAGAGGGTATCACCTGTTACCCATTCGGTCGGCAACTGTGTGAAGCGTGTTGTGGTCATTGTGAGCTCTGTCATCATCTTCAAAACAGCTGTCTCTCCCTTGAATGCTGCTGGTACCGCTATAGCTCTTGCTGGTGTTTTCCTCTATTCAAGGGTGAAGCGAATTAAGTCAAAACCAAAGGCAGTTTAA 1188 0.4562 MQSTAFTLPPSLPLRHTNPNRFNRSLNLLRLSAKSNDVASSSSPSFTRQSWSLSPSSSFKFRPQPLLSPPKATSVPESAGQSAADSSSLLKTLQLGSLFGLWYLFNIYFNIYNKQVLKACHFPVTVTVVQFAVGTVLVSVMWALNLYKRPKITGAMLAAIFPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEMPTPWVVGSLLPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKVMVKQEESLDNITLFSIITIMSFFLLAPAAIFMEGVKFTPAYLESVGLNVRQVYTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIIFKTAVSPLNAAGTAIALAGVFLYSRVKRIKSKPKAV* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2767 395 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 71 368 - -
Tpr3g2767 395 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 93 393 IPR004696 GO:0016021|GO:0022857|GO:0055085
Tpr3g2767 395 Pfam Triose-phosphate Transporter family 93 383 IPR004853 -
Tpr3g2767 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 137 229 - -
Tpr3g2767 395 PANTHER SOLUTE CARRIER FAMILY 35 71 368 - -
Tpr3g2767 395 MobiDBLite consensus disorder prediction 38 79 - -
Tpr3g2767 395 MobiDBLite consensus disorder prediction 38 63 - -
Tpr3g2767 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 282 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2767 Tpr-Chr3 28414420 28417792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2767 1 393 Antiporters AT5G33320 69.193 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2767 K15283 - gmx:100804563 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2918 5 52260775 52264280 Tpr3g2767 3 28414420 28417792 ECH
Tpr3g2767 3 28414420 28417792 Tpr3g2767 3 28414420 28417792 ECH