Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2758 ATGAATTTGAAGAAAAAGAGTGAATCTCGCAAGCCTCTTGCATTTGCTCCTAAAGTCATTCCAAGTGCAGACTCCGTGACTGAAGTTTTGATTGACCCAAACAAAACTCCAACTTCAGCACGCCATAAAAGAGGGTGCAACTGCAAGAAATCAAATTTGCAAACCCTAATTCTTGAAGTACCAGGAACAAACAGTTCAAAGGTACATTTAAGGTATCCAACCAATACTTCTGAAAATGTCCAAATTGTTGGAGGATGGAAAAATTTTTGCTTTGACAATGGAATACAATTCGGTGATAGGCTTCGAATTGAATTCAAACATGTTTATCCAAATGTTGGCAAAGTTTTTAAGGTTACAACCTAA 363 0.3691 MNLKKKSESRKPLAFAPKVIPSADSVTEVLIDPNKTPTSARHKRGCNCKKSNLQTLILEVPGTNSSKVHLRYPTNTSENVQIVGGWKNFCFDNGIQFGDRLRIEFKHVYPNVGKVFKVTT* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2758 120 Gene3D - 5 120 IPR015300 -
Tpr3g2758 120 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 4 52 - -
Tpr3g2758 120 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 4 52 IPR044522 GO:0003700
Tpr3g2758 120 SUPERFAMILY DNA-binding pseudobarrel domain 52 106 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2758 Tpr-Chr3 28315897 28331822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2758 1 52 CPP Transcription Factor Family AT3G22780 67.308 5.50e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2758 - - mtr:MTR_5g006530 84.3445