Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2754 ATGTCGACTGAAGTACGGGATGAAGTTGATATTGATGAAATTGAACTTCTTACAAATGTTGATTTCCCTCAAGCCATTAACATTGATGATTGGATTCCTTGTCAAGGTCAAATTTTTGATAGTGATGATGATGCTTATAATTTTTACTCTTCGTTTGCACAAAGAAGTGGTTTCTCAATTAGACGTCATCACGTTTATAGAAACACTACTGATGAGGGAAATCCACAAACAGTTTACAAAAGAGAGTTCGTTTGCCATCGATCCGGGGTTTCTAAATCAGTCAAAGTTAATGAACTGGAAAGTCAAAGGAAACGGAAAGCTTCAAGGTGTAGTTGTAGTGCTAGATTGGTGGTTGCTAAAGAGACAATTGGATCGGAAGAAAAATGGGTGGTAATATATTTCAACAATGTCCACAACCATGATTTGTTAGATGAGAAAGAGGTTCAATTTCTCCCTGCTTATCGTAACATCCTGGTTGTTGACCAAAACCGTATACTAATGATGTATAAAGCTGGTTGTTCCATTAATGTCACAATGAGATTGCTTGAATTAGAGAAAGGAATAGATGTAGGTAGTCTACCATTTATGGATAAAGATATTAGGAATTTCCTTCAAAACCAAAGTGGTATTGACAAACAAAATGATGCTTTAGATGTCTTGAAATTGTGTAAAGGGTTGAAAGAGTTAGATGATGCCTTCCAATATGATTACACAATAGATGAGAATAAGAAGTTGGAACACATTATTTGGGCATTTGGTGATTCAATCCGTGCATATGAATCTTTTGGGGATGTGGTTGTCTTTGATACTACTTATCGAATAAATCGTTATGATATGCCACTTGGAATATGGCTTGGAGTTGACAATCATGGGAATTCAGTTTTTTTTGGTTGTAATTTCCTAGCTTTTGTCAAAGGAAAGAATCCACAAACAATTCTTACAAATCAAGATCCCTCGCTTAAAGAAGCCATTGCAAATGAATTTCCGAACACAAAACATGCCTTTTGCATATGGCACATTTTGGCAAAGTTGCCAAGTTGGTTTTCGTTTGTATTAGGTGCAAGATATAATGACTTTAAATCTGAGTTTTTCAAGGTGTACCATTTAGATTGTGAAGATGATTTTGAACAATATTGGAAATCCATGGTTGCACAATTTGGTCTAACTTATTTGAAGGACTTTTTTTTTGCTGGGATGACAACAACTGGACGTTCGGAATCGATAAATTCATATATAAAACACTTCTTGGATGTTGGTGTTGCTGTCCAAATTAGGAATCAAGCTGGAGAGGAAGCAAGAATGCGTCAAAAGTATCATAATCATCTACTTAAAACAAGTTTTCCAATGGAGGAACATGTTGCATCTATACTCACACCTTATGCTTTTGGGTTGATTCAAATTGAGATTGAGTTATCTACAAAATACGCTGCAACTGAAACAAACAGTGGCTCTTTTATTGTGAAGCATCACACCAAAGATGATGGAGGTCGTCTTGTAACTTGGATAGAAGGTCAAGAATCAATTCGTTGCTCTTGTAAGGAATTTGAGTTTTCTGGAATATTGTGCAGGCATGCTATTCGAGTGCTTCTAATGAAAAATTATTTTCACATACCTTCAAAGTATCTTCCTTTTCGATGGAGACGTGAAAGTTCATTGATCCCAAAATCTAGTCACATAGTAAACAACAATGATGTCTCCTCTGCTGAGTTTCATTCTCTGATTCAATGTCTTGAATATGAATCTTTAAAAACAAAAGTACGGAAACAAATTGCTACTAAAGGGTTGGAGGATCTTATCCGAGAGATAAAAGGAATGTCCGAAAGTCATGAAGATCAAATTGGTTTGGAAGTTGTTCCAAATAATGATGAATGTGATGTTGGAATTCCAGTTAGAACTAGAAGCAAAGGTCGACCAAAAGGTTCAAAGGCAAAAGTAGTAGTTGAAGTTGTTTCAAATAATGATGAATGTGATGTTGGAAATCCAGTTAGAACCAAAAGCAAAGGTCGACCAAAACGATCAAGGCCAAAAGGAGGAGTTGAAGCTGCAACCAAGATTCGCCATTGTCTTATTCCGAATTGTGGTGCAACCGGCCATGACACACGGAATTGTCCAAACAAAAGGAAACATAATGACATATTGCCTAATGAATCACCTAATGAGTTCAAAATGGGTTGGAGAAATTCATCTAATTAA 2193 0.3602 MSTEVRDEVDIDEIELLTNVDFPQAINIDDWIPCQGQIFDSDDDAYNFYSSFAQRSGFSIRRHHVYRNTTDEGNPQTVYKREFVCHRSGVSKSVKVNELESQRKRKASRCSCSARLVVAKETIGSEEKWVVIYFNNVHNHDLLDEKEVQFLPAYRNILVVDQNRILMMYKAGCSINVTMRLLELEKGIDVGSLPFMDKDIRNFLQNQSGIDKQNDALDVLKLCKGLKELDDAFQYDYTIDENKKLEHIIWAFGDSIRAYESFGDVVVFDTTYRINRYDMPLGIWLGVDNHGNSVFFGCNFLAFVKGKNPQTILTNQDPSLKEAIANEFPNTKHAFCIWHILAKLPSWFSFVLGARYNDFKSEFFKVYHLDCEDDFEQYWKSMVAQFGLTYLKDFFFAGMTTTGRSESINSYIKHFLDVGVAVQIRNQAGEEARMRQKYHNHLLKTSFPMEEHVASILTPYAFGLIQIEIELSTKYAATETNSGSFIVKHHTKDDGGRLVTWIEGQESIRCSCKEFEFSGILCRHAIRVLLMKNYFHIPSKYLPFRWRRESSLIPKSSHIVNNNDVSSAEFHSLIQCLEYESLKTKVRKQIATKGLEDLIREIKGMSESHEDQIGLEVVPNNDECDVGIPVRTRSKGRPKGSKAKVVVEVVSNNDECDVGNPVRTKSKGRPKRSRPKGGVEAATKIRHCLIPNCGATGHDTRNCPNKRKHNDILPNESPNEFKMGWRNSSN* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2754 730 ProSiteProfiles Zinc finger SWIM-type profile. 485 533 IPR007527 GO:0008270
Tpr3g2754 730 SMART 26again6 508 535 IPR006564 GO:0008270
Tpr3g2754 730 MobiDBLite consensus disorder prediction 658 681 - -
Tpr3g2754 730 Pfam FAR1 DNA-binding domain 47 143 IPR004330 -
Tpr3g2754 730 Pfam SWIM zinc finger 504 533 IPR007527 GO:0008270
Tpr3g2754 730 Pfam MULE transposase domain 304 342 IPR018289 -
Tpr3g2754 730 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 31 606 - -
Tpr3g2754 730 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 606 IPR031052 GO:0006355
Tpr3g2754 730 MobiDBLite consensus disorder prediction 704 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2754 Tpr-Chr3 28222946 28226113 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g2754 FAR1 1.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2754 - - var:108339217 819.69