Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2751 ATGCTAAAAAAGATGGATGAAGTAGAAATCACAAATGGTAATAATTTCCCTCAAAATCCAACAACTAGTGCTTCTAATAATCCTCCTACTTTGAAGAGAAAAAGAAACCTCCCAGGAAATCCAGATCCTGAAGCAGAAGTTATAGCTTTATCACCAAAGACTCTTATGGCTACAAACAGATTCTTGTGTGAAACATGTGGGAAAGGTTTTCAAAGAGATCAAAACTTACAACTCCATAGACGCGGACATAATCTTCCATGGAAGCTTAAGCAGAGAACAAATAAAGAAATAAAGAAGAGAGTTTATGTTTGTCCTGAGAAGAGTTGTGTTCATCATGATCCTTCAAGGGCACTTGGTGACTTAACTGGGATAAAAAAGCACTTTTGTAGAAAGCACGGTGAAAAGAAGTGGAAGTGTGAGAAGTGCTCAAAACGTTATGCTGTTCAGTCAGATTGGAAAGCTCATTCAAAAACCTGTGGTACTAGAGAATACAAATGTGACTGTGGAACTATCTTTTCAAGGAGAGACAGTTTCATAACTCATAGAGCCTTCTGTGATGCATTAGCAGAAGAAACAGCAAGAGTAAGTGCAGCATCAGAAATAAACAACTCATTATTAAGGGGTAACATTGGTAATTACAACATAATGGGAACAACAACATCCTTAATCCCTACCAACATGATGTCAAACCATTTTTCATCAATTTTCAAACCAATTGCAACTCCTCCTCCTGATCATCATCATCATGAATCAATCAATCAAACTAGAGGACTCTCCCTTTGGATGAATCAAAATCAAACATCTCATGAAACAATGGTCACCACCAATGGAAATTCTAATTTGCATGAGATTCATCAACAACAACAACAACATGACACATCATCAAGAGGATTAATATATGATAATCCAAACTCAAATAATTATCAGCTTAATTGGGTTTTTGGTAATAAATTTTCCTCTAATTGCAATCAAGAATTAATTACTAGTACTACAACTTCACTTCCACTAGGAAACATTAATGTTAATATTAAGGATGTTACAAGCCAACAAATTTCTTCTCCATTGTATAGCTCACAACATCAAATACAATCACATCAAACATCATCAGCAAACATGTCAGCAACAGCTTTGTTACAAAAAGCTGCTCAAATTGGATCAGCCTCAAGTGACACATCATTCCTTGGAAGTTTAGGTTTGAAATGCAGTAATAATAATAACATTGGTGGTAATTCTGGTATGCATGGTACAACAAGTTCATTACTCATTAGTCTTGCCAATGAGGAAGATCATAACACTGCATGTGATTTTACACAAATGCAACCTTCTAAACGTAGACATGTGCAAAGTGATGAGAATGGTGGAGGGCATACTAGGGATTTTCTTGGTGTTGGTGTGCAAACCATTTGTCACCCTTCATCAATCAATGGATGGATTTGA 1437 0.3598 MLKKMDEVEITNGNNFPQNPTTSASNNPPTLKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEIKKRVYVCPEKSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVSAASEINNSLLRGNIGNYNIMGTTTSLIPTNMMSNHFSSIFKPIATPPPDHHHHESINQTRGLSLWMNQNQTSHETMVTTNGNSNLHEIHQQQQQHDTSSRGLIYDNPNSNNYQLNWVFGNKFSSNCNQELITSTTTSLPLGNINVNIKDVTSQQISSPLYSSQHQIQSHQTSSANMSATALLQKAAQIGSASSDTSFLGSLGLKCSNNNNIGGNSGMHGTTSSLLISLANEEDHNTACDFTQMQPSKRRHVQSDENGGGHTRDFLGVGVQTICHPSSINGWI* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2751 478 MobiDBLite consensus disorder prediction 1 40 - -
Tpr3g2751 478 PANTHER F-BOX ASSOCIATED PROTEIN 5 475 - -
Tpr3g2751 478 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Tpr3g2751 478 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 5 475 - -
Tpr3g2751 478 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Tpr3g2751 478 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Tpr3g2751 478 MobiDBLite consensus disorder prediction 11 33 - -
Tpr3g2751 478 Gene3D Classic Zinc Finger 40 113 - -
Tpr3g2751 478 Gene3D Classic Zinc Finger 130 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2751 Tpr-Chr3 28202641 28206222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2751 27 478 IDZ Gene Family AT1G03840 53.082 9.65e-147 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr3g2751 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2751 K25870 - gmx:100790620 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2751 3 28202641 28206222 Tpr3g2751 3 28202641 28206222 ECH