Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2740 ATGGAGGTTTGTTCAGAAGGAGAGGAGAAGAAGAACAACTCACTAGAGGAAGAGAACAAGGTCAAACGCAAAATGAAGTCTGCTTCGCAGTTAGAGATTCTTGAAAAAACTTATGCTGCTGAGTCTTACCCTTCTGAGGCAATTAGGGCTGAGTTATCTGTCAAGTTGGGCTTGTCTGATCGTCAGTTGCAGATGTGGTTCTGTCACCGGAGACAGAAGGATAAGAAGGCTGCACCGGTGATGGTTAAGAAGGAGGTCGACGTCGCGCTAACTTCGGCTCCATTCGAGGAGGGTGTCAGGCATGATCATGGTTTGGTTTCTGTCTTGAGACCAATTGGTAATGTGGACTCGCCGCAATTCGTGGCACAGCGTGGGATGATGGCATTTCCTAGGATGATGGCATTGCCTGCAATGGATAGCAGTAGTTACCATGAATCTCATCGGACTATACAGGAGTTACGAGTTGCTGCATTTGTGGAAAGACAGTTGGGGGAGCCATTGAGAGAGGACGGACCCATTCTTGGGATGGAATTTGATTCCCCGCCTCCAGGTGCATTTGGTGCATCGTTAGGGTCAGTGGCAATGGGGCAACACAGGCAATCTGAATGGCCTGTTGAGGCAAACATTTATGAACATTTGGATAAGGGAATTTCAAGGACTCTCCATGAATATCAATTTATTCCAGAGCAGCCAACTGTTAGAAATGAGATATATGAGAGAGTTACTGCATCTATTCCACATTCTAGGACATCACTATCTAGTTTGCCATCTTTCCTTAATGGGAATGAATCTGCACCTAAGGTGTATGGAGTCCAAGGTCAGAAGATACCTGGTCTAAATCTTTTGTCTCAGTCTGAGCAAGGTAGGCCGAACCATGTTATGCTTTCTGCTTCAGGAGGGAATGATGATGATGTACAAAAGAACCCATTTGCCGATGTAACTCTTGACATTCAAAGCGGGGCTAACCAAGTAACTCCGATTGATGGCCCTCTACTGCCATCTGATAGGAGGGTTATCCATGAGGAGGAACTTGAAAGGTTTCAAAGGAAGCGAAAGAATGAAGAGGCTAGAATGCAACGGGAATTTGAAGTGCAAGAGAAAAGAATTAGAAAAGAGCTTGTAAAACAGGATATTCTAAGGCAAAAGAGAGAGGAGCAAATAAAGAAAGAGATGGAGAGGCAAGAACGTGAAAGGCAGAAGGAAGAGGAAAGATTATTGCGTGAAAGACAGCGAGAGGAGGATAGGCTCCTTAGAGAACAGAGACGTGAGCAGGAGCGGCGGGAGAAGTTTTTGCAGAAGGAATCACTCAGAACTGAGAAAATGAGACAGAAGGAAGAACTACATAGGGTGAAAGAGGAGGCAAGGATTAAAGCTGCCAGTGAGAGAGCTATTGCCCGCAGAATGGTCAAAGACGCAATGGATCTTATTGAAGATGAACATCTGGAACTCATGGAATTAGCTGCATCAAAGAAGGGGCTATCTTCAATACTGGCTCTTGACTATGAAACTATGCAAAATCTTGAATCATATGGAGATGGGCAGACATTCTTCCCACCCAAGTCTGTACAGTTGAAAAGAGCTTTTTCAATTCAACCTTGGTCAGATTCTGACGAGAATGTAGGAAATCTTCTAATGCTTTGGAGGTTCTTGATTACCTTTGCTGATGTTCTTGGAATATGGCCATTTACCTTGGATGAGCTTATACAAGCTTTTCATGACTATGACCCTAGGATGTTAGGTGAGGTCCATATTGCTCTTCTGAGATCCATTATAAAAGATATTGAAGATGTTGCAAGAACACCCTCTACTGGATTAGGAGCTAACCAAAACAGTGTTATGAACTCTGGTGGGGGGCATCCACAAGTAGTTGAAGGGGCGTATGTATGGGGTTTTGATATAAGAAATTGGCAGCGGCATTTAAATCCATTAACATGGCCAGAGATTTTGCGACAATTTGCATTGTCAGCTGGATTTGGGCCGCAGTTGAAGAAACAGAATATTGAGCAGGTGCATCCTAGCAACAATGAGGGTAATGATGGTAAAGATATAATTTCTAATCTACGCAGTGGAGCTGCTGTTGAAAATGCTGTTGCTATTATGCAAGAGAAGGGATTATCTAATCCTAGAAGAAATAGGCATCGTTTAACGGCTGGAACTGTTAAATATGCTGCATTTCATGTCCTGTCTCTGGAAGGAAGCAGAGGCCTCAATATACTGGAAGTTGCAGACAAGATTCAGAAATCTGGACTTCGTGATCTTACAATAAGCAAAAATCCAGAGGCTTCTATAGCTTCTGCTTTATCTAGGGATTCAGAACTATTTGAAAAGACAGCTCCTTCAACATATTGTGTACGTCCTGCATATAGAAAGGACCCAGCTGATTCTGAAGCAATTTATTCAGCTGCTAGGGAAAGAATCAGGATATTCAAAAGTGGATTTGTGGGTGCAGAAGAAGCTAATGATTGTGAAAGGGATGAAGATTGTGAAAGCGATATGGCAAAAGATCCTGAAATTGATGATTTAGGAGCTCAACCAAATACGAAAAAGGAGGTCTCAAATTATGAGGAATTTAATGCAAACACTGTCGTGAGAAGTGGGAAGGACAATGGTGAGGTTTTGCAAACTCCTGAAAGTTGCCATGAGAAAGTGGATGAGGGTTTAAGATCAACTGTTGATGAAGGTTTCGACGAACATAAAGATGTTTGTATATCTAGTAAAATTACTGTTTGCAGCAATGACGTTGCTAATCCAATTCTAAAAGGCGTGGATGTTGATGAAAAGACTCCTGGTGAACCATGGGTACAAGGGCTTATGGAGGGAGAATACTCGGATCTTAGTGTTGAGGAGCGTCTTCATGCTCTTGTTGCTTTGATTTCTGTGGCAATTGAAGGAAATTCTATCCGTGTTGTGCTGGAGGAACGTCTAGAAGCCGCAAATGCTTTAAAGAAACAGATGGGGGCTGAGGCACATCTTGATAAACGCCGTATTAAAGAGGATTATTTTGTTAAAATGCAGTCTTCCTCATATTTGAAAAACAAGAATGAACCAGCTGTTACATTTCCATCTGTAGGGGGGAAACAGTGCCCATTGCATACTGTTGATGTCCAAAATGACAAGGCTTTGCTCACTCCCTGTGACCGGCGTGAACAGATAAATGCACAACAGGAAAATGAAAATCCTCTGCAGAGTTCCTTATTAGAAGTGAACATGCAGAGGCAAGATTGTTCTACTGGCCCGGATAATTATTCAATCCAACAATCTATATATGCTTCTGAAAGATCTAGGTCAAATTTAAAATCATACATTGATCACTTGGCTGAACAAACTTACATGATTAGATCATTGCCTCTTGGTTTGGATCGGAGAAGAAACCGATACTGGCAATTCACTACTTCTGCTTCTCAAAATGATCCAGGTTGTGGTAGGATATTTGTGGAATTGCGTGATGGCTGTTGGAAGCTGATTGATTCTGAAGAGGGTTTTGATGCTCTATTGGTATCATTGGATGTACGTGGGATAAGGGAATCCCACTTGAATATGATGTTGCAAAAAATTGAAATTTCCTTCAAAGAATCTGTTAGAAGAAATGTCCAAAATGGAGACACTGTCAAGAAACTTGATAGAGAAGCAGTTAAAATAGCTAAAGACCAAGATTGCAGTGCTAATATTTACTATCCTACTTCTGCATGCATGGATGATTTGGACACATCAGTGGCATCAACATCTTTTATGGTTCAGCTTGGAAGAACTGAAGTTGAGAACAAAGATGCTTATATGAGATATTGGGACTTTGAGAAATGGATGCGAAAGGAATGTCTAAATTGTTCAGTATCACGTGCAATGAAGTTTGGGAAGAAGAGGTGCAACCAAATACTTCTCATGTGTGATTTGTGCCATCATGTCTATTTCTTTAGAGGATCACCGTGTCCTTCATGCCATAGAACTTTCAGTACTAGTCAGGGGAACTCTGGTTCTTATGAAAGTTTTGCTCATTCTGAAGGCAAAATGAATATTGACACTCATTTGTCTCATGATTCTTCCTCTTCTCCAATGAGGATGAGATTGCTCAAAATCCTCTTGTCAGTTGTTGAGGTAACCCTTCCTCAAGAAGCTCTGCAACCTTTTTGGACAGAGAGGTACAGGAAGTCTTGGAGTTCAAAACTAGAAGCTTCCTCATCAACCGAAGACATTCTACAGATGTTGACTGCATTGGAAGGTGCTATAAAAAGGGAGTATTTGGCTTCAGACTATGAAACTACCAGTGAGCTGTTAGGTTCAGTTTGCTCGTCCGGATGTATCCCTAATGATACCATTGGTGGTGGTAGGATACCTGTACTTCCATGGGTGCCATATACAACTGCTGCTGTGGCTCTGAGGCTCATGGAACTTGATGAATGCGCCTTTTACACCTCACAACAGAAGCTGGAGTCCAAGAAGGATGAAAAAGTTGGAATTGTTGTGAAGCTTCCATCAAAATATGCTGCTGCCAAAAATTCCTACGATGCTGGTGCATTTGTAACTTCATTTCAGGCTAAGCATACTGTAGAGGACCGGGGTGCTCTTGGTGCTGGCCTCGAGAGCTGCAGCAAACGACAAAGGACTCGACAAGGCCGCAGCCATTCTCGTGATCAAAGATCACAGGGAAGAGTTGCTAGTTCCAGATCGACTTCCAGAAAGAGAAGCACTACATCTAACAGTAGGAAAAAAGATAGTAGGATAAAAGGAAAGTTACTTGGATGGAAAGGGACGCCAAACGTTCGTGGTCGGAGGAGCATTAGAAGCAGGCAGAAACCTGCAGCCAAGATGGATGTGATCATCAGTGAGAAGCATACCCCAAAAGATATCACAGAGGAAACGCCAATCTTTGCCATAGAGGAGATTAATGAATGTGAAACTGAAGCCAATGCGCGAAATGCTAGCAATTTGGAAAGATCAGACTATGAAGGTGATCTTTATGGAGCAACAGATGAGTATCATCATCTAGTAGATAATAATAATAATGATGGATATAAGGGTGGATTTAGTGGGAAATCTGAGAACTTAATAGCTCAAAGCCACTATAATATGGATGATGAGAATGATGTGAATATGGATGACGATAACAGCGAGGAAGATGGGCAAGTCAATCTTAATACTGAAGATTATATAATTGGAGGGGACTCGGATACTGGGTACAACAGAGAAGAAAATGAAGAACATGAGGATCCAGATGGAGATGGTTCTACATCATCAGATTGCGGTGACTAA 5247 0.4212 MEVCSEGEEKKNNSLEEENKVKRKMKSASQLEILEKTYAAESYPSEAIRAELSVKLGLSDRQLQMWFCHRRQKDKKAAPVMVKKEVDVALTSAPFEEGVRHDHGLVSVLRPIGNVDSPQFVAQRGMMAFPRMMALPAMDSSSYHESHRTIQELRVAAFVERQLGEPLREDGPILGMEFDSPPPGAFGASLGSVAMGQHRQSEWPVEANIYEHLDKGISRTLHEYQFIPEQPTVRNEIYERVTASIPHSRTSLSSLPSFLNGNESAPKVYGVQGQKIPGLNLLSQSEQGRPNHVMLSASGGNDDDVQKNPFADVTLDIQSGANQVTPIDGPLLPSDRRVIHEEELERFQRKRKNEEARMQREFEVQEKRIRKELVKQDILRQKREEQIKKEMERQERERQKEEERLLRERQREEDRLLREQRREQERREKFLQKESLRTEKMRQKEELHRVKEEARIKAASERAIARRMVKDAMDLIEDEHLELMELAASKKGLSSILALDYETMQNLESYGDGQTFFPPKSVQLKRAFSIQPWSDSDENVGNLLMLWRFLITFADVLGIWPFTLDELIQAFHDYDPRMLGEVHIALLRSIIKDIEDVARTPSTGLGANQNSVMNSGGGHPQVVEGAYVWGFDIRNWQRHLNPLTWPEILRQFALSAGFGPQLKKQNIEQVHPSNNEGNDGKDIISNLRSGAAVENAVAIMQEKGLSNPRRNRHRLTAGTVKYAAFHVLSLEGSRGLNILEVADKIQKSGLRDLTISKNPEASIASALSRDSELFEKTAPSTYCVRPAYRKDPADSEAIYSAARERIRIFKSGFVGAEEANDCERDEDCESDMAKDPEIDDLGAQPNTKKEVSNYEEFNANTVVRSGKDNGEVLQTPESCHEKVDEGLRSTVDEGFDEHKDVCISSKITVCSNDVANPILKGVDVDEKTPGEPWVQGLMEGEYSDLSVEERLHALVALISVAIEGNSIRVVLEERLEAANALKKQMGAEAHLDKRRIKEDYFVKMQSSSYLKNKNEPAVTFPSVGGKQCPLHTVDVQNDKALLTPCDRREQINAQQENENPLQSSLLEVNMQRQDCSTGPDNYSIQQSIYASERSRSNLKSYIDHLAEQTYMIRSLPLGLDRRRNRYWQFTTSASQNDPGCGRIFVELRDGCWKLIDSEEGFDALLVSLDVRGIRESHLNMMLQKIEISFKESVRRNVQNGDTVKKLDREAVKIAKDQDCSANIYYPTSACMDDLDTSVASTSFMVQLGRTEVENKDAYMRYWDFEKWMRKECLNCSVSRAMKFGKKRCNQILLMCDLCHHVYFFRGSPCPSCHRTFSTSQGNSGSYESFAHSEGKMNIDTHLSHDSSSSPMRMRLLKILLSVVEVTLPQEALQPFWTERYRKSWSSKLEASSSTEDILQMLTALEGAIKREYLASDYETTSELLGSVCSSGCIPNDTIGGGRIPVLPWVPYTTAAVALRLMELDECAFYTSQQKLESKKDEKVGIVVKLPSKYAAAKNSYDAGAFVTSFQAKHTVEDRGALGAGLESCSKRQRTRQGRSHSRDQRSQGRVASSRSTSRKRSTTSNSRKKDSRIKGKLLGWKGTPNVRGRRSIRSRQKPAAKMDVIISEKHTPKDITEETPIFAIEEINECETEANARNASNLERSDYEGDLYGATDEYHHLVDNNNNDGYKGGFSGKSENLIAQSHYNMDDENDVNMDDDNSEEDGQVNLNTEDYIIGGDSDTGYNREENEEHEDPDGDGSTSSDCGD* 1749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2740 1748 MobiDBLite consensus disorder prediction 1523 1600 - -
Tpr3g2740 1748 ProSiteProfiles 'Homeobox' domain profile. 17 77 IPR001356 GO:0003677
Tpr3g2740 1748 SUPERFAMILY Homeodomain-like 17 76 IPR009057 -
Tpr3g2740 1748 SMART testlast3 537 596 IPR018501 -
Tpr3g2740 1748 Pfam HB1, ASXL, restriction endonuclease HTH domain 718 785 IPR007759 GO:0006355
Tpr3g2740 1748 ProSiteProfiles DDT domain profile. 537 596 IPR018501 -
Tpr3g2740 1748 Coils Coil 337 364 - -
Tpr3g2740 1748 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1112 1185 IPR028941 -
Tpr3g2740 1748 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1747 IPR044977 GO:0006357
Tpr3g2740 1748 CDD homeodomain 20 76 IPR001356 GO:0003677
Tpr3g2740 1748 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 929 972 IPR028942 -
Tpr3g2740 1748 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1747 - -
Tpr3g2740 1748 Coils Coil 433 453 - -
Tpr3g2740 1748 Gene3D - 4 78 - -
Tpr3g2740 1748 Pfam Homeodomain 22 76 IPR001356 GO:0003677
Tpr3g2740 1748 Coils Coil 968 988 - -
Tpr3g2740 1748 Pfam DDT domain 538 593 IPR018501 -
Tpr3g2740 1748 ProSiteProfiles HARE-type HTH domain profile. 718 787 IPR007759 GO:0006355
Tpr3g2740 1748 MobiDBLite consensus disorder prediction 1700 1748 - -
Tpr3g2740 1748 Coils Coil 380 427 - -
Tpr3g2740 1748 SMART HOX_1 19 81 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2740 Tpr-Chr3 27884897 27902392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2740 18 1482 Homeobox Transcription Factor Family AT5G44180 50.067 0.0 1271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Tpr3g2740 WSD 2.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2740 - - gmx:100797480 2138.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2740 3 27884897 27902392 Tpr3g2740 3 27884897 27902392 ECH