Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2736 ATGGGTGTAGACTACTACAAAATCTTGCAGGTTGATAAGAATGCCAATGATGACGAATTGAAGAAGTCTTATAGGAAACTTGCAATGAAATGGCACCCTGATAAAAATCCAACCAACAAAAAAGAAGCAGAAACTAAGTTCAAGCAAATTTCCGAAGCCTATGATGTACTTAGTGATCCTGAAAAGAGAGCTATCTATGATCAATATGGGGAAGAGGGTTTAAAGGGTCAAGTTCCTCCTCCTGATGCTGGTAGTGGTAGTGGAACTAGTTTCTATTCCACAGGAGATATCCCCGGATCGTTTCAGTTCAATCCGAGGAATGCAGATGACATTTTTGCTGAATTTTTTGGATTCTCAAGTCCATTTGGTGGCATGGGTGGAAGAGGTGGCAGTGGCGGCGGCGGCATGAGATCTAGGTTCCCTGGTGGAGTGTTTGGTGATGATATGTTTGGATCTTTCGGGGAAGGAGGAGGAATACATGTGAATCAAGCTGCACCTCGTAAAGCTCCTGCTATTGAGAACAAGTTGAGTTGCACTCTTGAGGAGATATATAGAGGAACTACTAAGAAGATGAAGATCTCTAGAGAAATAGCTGATGCTAGTGGCAAAACCATGCCAGTGGAAGAGATATTGACCATAACTGTGAAGCCTGGTTGGAAGAAGGGGACAAAGATCACCTTCCCAGAAAAGGGTAACGAACAGCCAAATGTAACCGCTGCAGATCTTGTTTTTGTGATTGATGAAAAGCCACACAGCATCTTCAGTCGCGAAGGGAACGATCTAATTATGACTCAAAAGATATCTCTTGCAGAGGCCTTAACTGGTTATACAGTGCACCTCACAACACTAGATGGTAGAAACTTAAGCATACCAATCAACAATGTTATCCATCCTAACTATGAGGAGGTTGTTCCAAAAGAAGGAATGCCAATCCCCAAGGATCCATCAAAGAAAGGGAATTTGAGGATAAAGTTTAACATTAAGTTCCCAACTCGTCTCACTGATGAACAAAAAGCAGGAATTAGAAAACTCTTGGCTGCCTCGGGCTGA 1050 0.4257 MGVDYYKILQVDKNANDDELKKSYRKLAMKWHPDKNPTNKKEAETKFKQISEAYDVLSDPEKRAIYDQYGEEGLKGQVPPPDAGSGSGTSFYSTGDIPGSFQFNPRNADDIFAEFFGFSSPFGGMGGRGGSGGGGMRSRFPGGVFGDDMFGSFGEGGGIHVNQAAPRKAPAIENKLSCTLEEIYRGTTKKMKISREIADASGKTMPVEEILTITVKPGWKKGTKITFPEKGNEQPNVTAADLVFVIDEKPHSIFSREGNDLIMTQKISLAEALTGYTVHLTTLDGRNLSIPINNVIHPNYEEVVPKEGMPIPKDPSKKGNLRIKFNIKFPTRLTDEQKAGIRKLLAASG* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2736 349 SMART dnaj_3 3 62 IPR001623 -
Tpr3g2736 349 SUPERFAMILY HSP40/DnaJ peptide-binding domain 254 339 IPR008971 GO:0006457|GO:0051082
Tpr3g2736 349 CDD DnaJ 4 59 IPR001623 -
Tpr3g2736 349 Gene3D - 251 331 - -
Tpr3g2736 349 Gene3D - 170 249 - -
Tpr3g2736 349 Pfam DnaJ domain 4 67 IPR001623 -
Tpr3g2736 349 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 346 - -
Tpr3g2736 349 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Tpr3g2736 349 PRINTS DnaJ domain signature 6 24 IPR001623 -
Tpr3g2736 349 PRINTS DnaJ domain signature 24 39 IPR001623 -
Tpr3g2736 349 PRINTS DnaJ domain signature 42 62 IPR001623 -
Tpr3g2736 349 PRINTS DnaJ domain signature 62 81 IPR001623 -
Tpr3g2736 349 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 346 - -
Tpr3g2736 349 CDD DnaJ_C 172 333 - -
Tpr3g2736 349 SUPERFAMILY Chaperone J-domain 3 130 IPR036869 -
Tpr3g2736 349 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Tpr3g2736 349 Gene3D DnaJ domain 3 126 IPR036869 -
Tpr3g2736 349 SUPERFAMILY HSP40/DnaJ peptide-binding domain 166 262 IPR008971 GO:0006457|GO:0051082
Tpr3g2736 349 Pfam DnaJ C terminal domain 172 330 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2736 Tpr-Chr3 27836476 27839480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2736 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 2.37e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2736 K09510 - gmx:100797487 590.882