Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2721 ATGGATTTACCAACAATTGACGTAGACCTTGAAGTACCTAAGAAGATTGAAGATGAGAAAGAGGGAGGTCCTTTGTTCCATTGCAGTCTTTGTGATACAGAAGTAATTCACAAGTTGGCTCAAATGTTCCTTCCAGGATTAGCCTCAGCTTGTGTCGATAACACAACAGGAGGTCTTTTCAAGACCCCTGGTTCAGTTGCTGTTGATTTGAGAAGGGAAATGATTGATTATCTAACCTTAAGAACCGAATCTTTTGTTGCTGAGTCTGTTATCTTGGAAGGTGGTGAGGCATCCGACCATCCTTTCGACATCATTTCCAATCTCGTTGACGACTTTGCAAGTTCAAAGAGAAATTTTTTTAGTCGTGTTTCGGTATGGTTGTTGAGCGAAAAGAGAGAAGATAAAATTGATGATTTCATCCAAGAGATAGACATGAACGGTTTTTGGACGCTTGATAGAAGAGAAATAGTTGCAGAAACTTTGCTAAAAAATGTTGACTTTCATAATTCATTTCATTGCACTATGAGTTTTAGTTCTTCTCAAGACCTTGCCGATCATGTTTTTACTTGTAATTTTAGACCCGTGGTTTGCCAAAATCAAGGATGCAATACTAAATTTTGTGCAAGTCATTTGGAAAAACATGATTCAATATGCCCTTTCAAGATAATTTCATGTGAACAAAAGTGTTCAAATAACAGTATTATGAGACGGGATATGGATAGACATTGTATAACTGTTTGTCCAATGAAGCTGGTAAATTGTCCTTTTCACGCAGTGGGTTGTCGGTCGGCTGTTGCACAGTGTATGATTGAAAAGCATTGTTTGGATGACTTACGATCTCATGTGTGGCACTTGCTTAAAGGTATCTACAAGGAAGCATTTGGGGATGATCTTCAACGACGAGTCAACCAAATTGCATTACCAAGCAACCAATTATCTAAAGCTCGGGATATTCGATCTTTGAAGTTCATTGTCAAGGATGTTGAAGCTAAGCTAGGGCCTTTTGAGGTCAGTGTTGAGCAAAAAAAGAATACAGATACCACAAAAGATGAAAATGACAACAATACAAATATTGACAGTGAACGAAGCACACATGCTTCAGATACGGTTATTTCACCCTCATCAAATAAAGCTGAAGTTAATGATGTCTCAACTATGCAAATTCCAGAGAATGTTGGCAAGAGTGAAGAAATTGAACATAGTAACATTGAAATCAAGGACAATGAAGAAATGATACCAACTTCAAATGACAAGAGTGAAGAAAATATTAATATTGAAATCAAGGGCAATGGAGAAACAATGCAAACTTCAAATGGCAAGAGTGGAGAAATTGAACATAGTAACATTGAAACCAAGGGCAATGAAGAAATGATACAAACTTCAAATGGCAAGAGTGAGGATATTGAACATAGTAACATTGAAACCAAGAACAATGAAGAAATGATACAAACTTCAAATACTGCAAAGTTACCTAGTGAAGCTGAAGCCGAAGTTGGCCTTGTGAGGGAAGACATTACAGAGAATTATAACGATGTTGTCGCTAGTGAATTAAAATTCGAGGGCAATGAAGAGAATACTCGTAAAAGTATAGAAAAATCGGCAAAAGAAATCAGTGCCACAAATGAGGACCGCGTAAATAATAATAGCATAACAAACAAATCTATTGAAAATGATAACTTTGAAGATAGTGACAATGTACAAAGCATTCAGAACTCAACAATGGAAATTGCAGGCAATGTAGATAATAATGTCAAGAACAGATATACTGCAGAAGATGATAACTTAAAATAG 1791 0.3646 MDLPTIDVDLEVPKKIEDEKEGGPLFHCSLCDTEVIHKLAQMFLPGLASACVDNTTGGLFKTPGSVAVDLRREMIDYLTLRTESFVAESVILEGGEASDHPFDIISNLVDDFASSKRNFFSRVSVWLLSEKREDKIDDFIQEIDMNGFWTLDRREIVAETLLKNVDFHNSFHCTMSFSSSQDLADHVFTCNFRPVVCQNQGCNTKFCASHLEKHDSICPFKIISCEQKCSNNSIMRRDMDRHCITVCPMKLVNCPFHAVGCRSAVAQCMIEKHCLDDLRSHVWHLLKGIYKEAFGDDLQRRVNQIALPSNQLSKARDIRSLKFIVKDVEAKLGPFEVSVEQKKNTDTTKDENDNNTNIDSERSTHASDTVISPSSNKAEVNDVSTMQIPENVGKSEEIEHSNIEIKDNEEMIPTSNDKSEENINIEIKGNGETMQTSNGKSGEIEHSNIETKGNEEMIQTSNGKSEDIEHSNIETKNNEEMIQTSNTAKLPSEAEAEVGLVREDITENYNDVVASELKFEGNEENTRKSIEKSAKEISATNEDRVNNNSITNKSIENDNFEDSDNVQSIQNSTMEIAGNVDNNVKNRYTAEDDNLK* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2721 596 SUPERFAMILY TRAF domain-like 173 226 - -
Tpr3g2721 596 MobiDBLite consensus disorder prediction 341 379 - -
Tpr3g2721 596 MobiDBLite consensus disorder prediction 540 562 - -
Tpr3g2721 596 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 1 560 IPR043211 -
Tpr3g2721 596 MobiDBLite consensus disorder prediction 520 562 - -
Tpr3g2721 596 MobiDBLite consensus disorder prediction 359 379 - -
Tpr3g2721 596 Pfam TRAF-type zinc finger 214 273 IPR001293 GO:0008270
Tpr3g2721 596 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 186 249 IPR013083 -
Tpr3g2721 596 ProSiteProfiles Zinc finger TRAF-type profile. 209 262 IPR001293 GO:0008270
Tpr3g2721 596 MobiDBLite consensus disorder prediction 520 539 - -
Tpr3g2721 596 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 1 560 - -
Tpr3g2721 596 MobiDBLite consensus disorder prediction 342 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2721 Tpr-Chr3 27589243 27591876 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr3g2721 zf-TRAF 9.5e-11 CL0389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2721 - - gmx:100819268 623.239