Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2717 ATGGCTTCTGCTATGTTTCTTAGTCTTATGTTTCTGTTGCCAACAATGTTGCTTGAAGCAAAGGAGTATGATGTTGGTGGCAAAGATGGTTGGGTCCTGAAACCTTCTGATTACTACAGTCGCTGGGCTCAATCAAATAGGTTTCAAATCAATGACACTCTCTATTTCAAGTACAATAAAGCGAATGATTCGGTTCTTGTGGTGAAAAAGGAGAACTATGATTCTTGCAACACCAATAATCCAAAACAAAAGATGGACGATGGGGATTCAAGATTTAAGCTCAGTGATTCTGGTCTCTATTATTTCATTAGTGGCAATGTTGAAAATTGCAAACATGGTGAAAAAGTTATTGTTTTAGTCATGGCTAGACACAAACACCACCCTCTTCCCACCACTGCACCTGCACCGTCTCAGCCGCCAGCAAGTGCCTTGTCGCCTCCTCAGATTCACTCGTCTACTTTGGATACTCCGGCGCCGTCTCCGTCTAAAGCAAGTTTTGTTGGTGTGAGTGTGGGATTTAGGGTTATGGTTTGGATTGTTTTGGTGTTTAGTACTAGCTATGCAGGGTTTGTTTATTAG 579 0.4197 MASAMFLSLMFLLPTMLLEAKEYDVGGKDGWVLKPSDYYSRWAQSNRFQINDTLYFKYNKANDSVLVVKKENYDSCNTNNPKQKMDDGDSRFKLSDSGLYYFISGNVENCKHGEKVIVLVMARHKHHPLPTTAPAPSQPPASALSPPQIHSSTLDTPAPSPSKASFVGVSVGFRVMVWIVLVFSTSYAGFVY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2717 192 CDD OsENODL1_like 21 121 IPR041846 -
Tpr3g2717 192 SUPERFAMILY Cupredoxins 20 121 IPR008972 -
Tpr3g2717 192 MobiDBLite consensus disorder prediction 144 160 - -
Tpr3g2717 192 PANTHER EARLY NODULIN-LIKE PROTEIN 1 9 134 - -
Tpr3g2717 192 Gene3D - 19 125 IPR008972 -
Tpr3g2717 192 Pfam Plastocyanin-like domain 32 113 IPR003245 GO:0009055
Tpr3g2717 192 MobiDBLite consensus disorder prediction 128 162 - -
Tpr3g2717 192 ProSiteProfiles Phytocyanin domain profile. 21 122 IPR003245 GO:0009055
Tpr3g2717 192 PANTHER BLUE COPPER PROTEIN 9 134 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2717 Tpr-Chr3 27553110 27553848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2717 5 184 Phytocyanin Superfamily AT4G28365 44.385 3.77e-43 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2717 - - gmx:100803858 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2717 3 27553110 27553848 Tpr3g2717 3 27553110 27553848 ECH